8 homologs were found in PanDaTox collection
for query gene Afer_1388 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_1388  hypothetical protein  100 
 
 
206 aa  401  1e-111  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.410028  n/a   
 
 
-
 
NC_008390  Bamb_2406  TOPRIM domain-containing protein  33.33 
 
 
797 aa  65.9  0.0000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.348772  n/a   
 
 
-
 
NC_010501  PputW619_4351  hypothetical protein  32.61 
 
 
395 aa  64.7  0.0000000009  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00215694 
 
 
-
 
NC_010508  Bcenmc03_1283  AAA ATPase  34.97 
 
 
392 aa  62.4  0.000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0261303  normal  0.841625 
 
 
-
 
NC_008726  Mvan_2513  hypothetical protein  24.53 
 
 
536 aa  55.5  0.0000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.450265 
 
 
-
 
NC_007948  Bpro_2969  hypothetical protein  31.17 
 
 
412 aa  52  0.000007  Polaromonas sp. JS666  Bacteria  normal  0.746485  normal 
 
 
-
 
NC_007434  BURPS1710b_3667  hypothetical protein  30 
 
 
518 aa  46.6  0.0003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.333104  n/a   
 
 
-
 
NC_009076  BURPS1106A_3697  TOPRIM  26.48 
 
 
512 aa  43.5  0.002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.779758  n/a   
 
 
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