Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2406 |
Symbol | |
ID | 4309526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2653394 |
End bp | 2655787 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638150241 |
Product | TOPRIM domain-containing protein |
Protein accession | YP_774296 |
Protein GI | 115352457 |
COG category | [S] Function unknown |
COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.348772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTTA ATGTAGAACA AGAACGCATG CGCGCGGCAC TGAGCCACGT ACCGGCAGAC GACCGCGATA CGTGGGTTCA GATGGGTATG GCTATCAAGG CCGAGTTCGG CGAAGCCGGG TTCGACTTCT GGGACGACTG GTCGCGTTCT GCCTCGAACT ACAGCGAGGC CGATGCGAAA TCGGTCTGGA AGTCGTTTCG CTCGGGCGGT ATCACGATCG CCAGTCTGTT CAAGCGAGCG ATCGAGCATG GCTACCGTGA AAGCGAGCCC ATGACCGCGC TGTCGGCCGA CGAGCGCGAA CGCCGCCGAG TTGAACGTGA TCGTGAAGCG GCCGCCGCCG CAGAGATCCA CCAACGCACG CAGGCGGCCG CGGCCACCAG GGCACGCAAT CTCTGGGAGA AGGCCGGTAC CGTTCATGCG GACCACGCCT ACGTCCGCGC GAAGCGAATC AAGCCCTACG GAGCGAAGCA ACTGCGTGAC CAGCTCGTCG TCAAGCTGCA GGACATTGAC GGCGAGCACC ATTCCGCACA ATACATCCAG GCAGATGGTC ACAAAACCTT CCAGACCGGT GGCCGAATCA GCGGGTGCTT CGTCGTGGTC AGTGCCGGAG TCAAGCCGAA TGGCAAGACA CCGCTGCTAA TCTGCGAGGG TTACGCGACG GCCTGTTCGC TTCACGAAGC AACGGGTTAT CCCGTCGCTG CGGCTATGAA TGCCGGTAAC CTTCTGAACG TCGCGCGCGC CTGGCGCCAA AAGCATCCTG AGCTGCGTAT TGTGCTCTGT GCGGACGACG ACGCGGAAAC TGCCGGTAAT CCGGGCATGA ACAAGGCAAC CGAGGCAGCG CGCGCGGTCG CTGCATTTCT AGCGGTGCCT GACTTCGGTA AAGACCGCCC CGCACAAGTA TCGGATTTCA ATGACCTGCA CTGCCTCGAT GGGCTCGAGG TGGTACGACG CTGCGTCGAC GCGGCGACTG CGGCGGTCGA CGCCACCGCC CCTAAGAAGC GCCCGGCGCC GACCGTCAAC CTCTCCTGCG CGGCCGACAT CGTGCCGGAG CCGATTCACT GGCTCTGGCC TGGCTGGCTG CCTGCCGGCA AGCTCTCGAT CCTCGCCGGG CAACCTGGGT GCGGAAAAAC GACCATTGCC ATTTCGCTGT CGTCTGCCAT CTCGAACGGC GCAGAGTGGC CGGACGGTGC ACGCTGCAAA GCGCCGGGAA ACGTTTTGAT CTGGACCGGA GAAGACGGGC TCGCCGATAC GCTTGTCCCT CGCCTTATGG CAGCCGGCGC TGATCTCAGG CGCGTTTTCT TCGTGGAGTC GATCACGAAT GAGGCGGGCG GGCTCCAGCC ATTCGATCCA AGCCGCGATG TTCCCATTCT GGCCGAGCGC GTCGAGCAGA TCGGCGGTGC GAGCATGCTT GTCGTCGATC CAATCATCAG TGTGGTGAAC GGCGACTCTC ACAAGTCCGG CGACGTTCGG AAATCGCTTC AGCCGCTGAT CGACCTCGGG GCTGCCCACG GGTGCGCAAT CCTCGGCATC ACGCACTTCT CGAAGGGCTC GAAGGGCTCA TCGCCGACCG AGCGCATTCT TGGCTCGCAG GCGTTCGGCG CCGCTGCGCG GATGATTCTG GTCGCCGGCA AGGATGACGC GTCAGACCGC CGGATCTTCG CCAAGTCGAA ATGCAATATC GCCGGCGATT CCGGGGGGTT CGAGTATGCG ATCGAAACGC TCGACGCTCA GGACGGTCTC GCATCAAGCC GGATCGCATG GGGCGAACCT CTCGACGGCT CGGCGCGCGA GATCCTCCGC GAACTGGAGG CCGATGACCA GGACACCGAC GAGCAGAACG AGCGCGAATC GAAGTTCGAG CGTGCACGTT GCATGCTTTA CGAATGGCTA ACTCCTTTCA TGAGCACCAA GGAGATGAAA GCAGCGGCCC AGGCCGAAGG CGTGAGCTGG CGTATGGTGG AAGCTGCCAA GGCCGCCGAG GTGAAGGCCG GCAACAAAAT CCGAGCCGTG AAGCATGGCA AGGATTGGGG ATGGATTTGG GATAATCACG ACGCCAAGTA CGGCGATTCA ACTCCGCACT CGCAGATCGT CTCAAGTCCG CAAGAAATTC AAGTCCGCAA AGGCGATTGC GGAGTTGAAT CCATTATCCA GCAAGGATCA GAAGCCAAGT CCGCAAGTCC GCAGTCGGTT GGCGGGGTTG CCGGCATTGC CCACACATGT CCGCAATCCC CCGTCAACTC CGTACACTCA GGAAATCATT GCGGAGTTGC GGACTTGACG GCAAACCCTT ACCCATCAAG GGAGTCAACT CCGCAATCAC GTCCGCATCC CGTCTCAGAC TGCGGACTTG ACGGTGATGT CGCGGCGGCG GCCGAACTGG AGGACGACGT ATGA
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Protein sequence | MSVNVEQERM RAALSHVPAD DRDTWVQMGM AIKAEFGEAG FDFWDDWSRS ASNYSEADAK SVWKSFRSGG ITIASLFKRA IEHGYRESEP MTALSADERE RRRVERDREA AAAAEIHQRT QAAAATRARN LWEKAGTVHA DHAYVRAKRI KPYGAKQLRD QLVVKLQDID GEHHSAQYIQ ADGHKTFQTG GRISGCFVVV SAGVKPNGKT PLLICEGYAT ACSLHEATGY PVAAAMNAGN LLNVARAWRQ KHPELRIVLC ADDDAETAGN PGMNKATEAA RAVAAFLAVP DFGKDRPAQV SDFNDLHCLD GLEVVRRCVD AATAAVDATA PKKRPAPTVN LSCAADIVPE PIHWLWPGWL PAGKLSILAG QPGCGKTTIA ISLSSAISNG AEWPDGARCK APGNVLIWTG EDGLADTLVP RLMAAGADLR RVFFVESITN EAGGLQPFDP SRDVPILAER VEQIGGASML VVDPIISVVN GDSHKSGDVR KSLQPLIDLG AAHGCAILGI THFSKGSKGS SPTERILGSQ AFGAAARMIL VAGKDDASDR RIFAKSKCNI AGDSGGFEYA IETLDAQDGL ASSRIAWGEP LDGSAREILR ELEADDQDTD EQNERESKFE RARCMLYEWL TPFMSTKEMK AAAQAEGVSW RMVEAAKAAE VKAGNKIRAV KHGKDWGWIW DNHDAKYGDS TPHSQIVSSP QEIQVRKGDC GVESIIQQGS EAKSASPQSV GGVAGIAHTC PQSPVNSVHS GNHCGVADLT ANPYPSREST PQSRPHPVSD CGLDGDVAAA AELEDDV
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