28 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
Rleg2_4433  CDS  NC_011368  65162  66616  -  1455  amino acid permease-associated region  YP_002278429  decreased coverage  0.000000491134  normal  0.744647  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4458  CDS  NC_011368  91239  92225  -  987  transcriptional regulator, AraC family  YP_002278454  normal  1  decreased coverage  0.00884299  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4459  CDS  NC_011368  92336  92839  -  504  transcriptional regulator, MarR family  YP_002278455  normal  1  decreased coverage  0.00777339  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4460  CDS  NC_011368  93098  93364  +  267  hypothetical protein  YP_002278456  normal  0.894817  decreased coverage  0.0074977  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4515  CDS  NC_011368  153758  154798  +  1041  Monosaccharide-transporting ATPase  YP_002278511  decreased coverage  0.00130543  normal  1  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4570  CDS  NC_011368  206025  206909  +  885  binding-protein-dependent transport systems inner membrane component  YP_002278565  decreased coverage  0.00536554  normal  1  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4572    NC_011368  208084  209735  +  1652      decreased coverage  0.00189964  normal  1  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4573  CDS  NC_011368  209895  210284  +  390  hypothetical protein  YP_002278567  decreased coverage  0.00518956  normal  1  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4707  CDS  NC_011368  347619  348500  -  882  alpha/beta hydrolase fold  YP_002278698  decreased coverage  0.00298325  normal  0.911417  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4840  CDS  NC_011368  482901  483569  +  669  polar amino acid ABC transporter, inner membrane subunit  YP_002278819  normal  0.898949  decreased coverage  0.00597159  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_4841  CDS  NC_011368  483601  484479  +  879  dihydrodipicolinate synthase  YP_002278820  normal  1  decreased coverage  0.00571792  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5044  CDS  NC_011368  691430  692515  -  1086  transcriptional regulator, Fis family  YP_002279005  decreased coverage  0.000694611  normal  1  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5365  CDS  NC_011368  994976  996013  -  1038  transcriptional regulator, LacI family  YP_002279285  decreased coverage  0.000864241  normal  0.850622  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5404  CDS  NC_011368  1046552  1048186  +  1635  ABC transporter related  YP_002279324  normal  0.235507  decreased coverage  0.00147169  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5407  CDS  NC_011368  1050023  1051759  +  1737  dihydroxy-acid dehydratase  YP_002279327  normal  0.205419  decreased coverage  0.00130415  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5408  CDS  NC_011368  1051769  1052959  +  1191  Mandelate racemase/muconate lactonizing protein  YP_002279328  normal  1  decreased coverage  0.00119776  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5410  CDS  NC_011368  1053807  1055324  +  1518  Aldehyde Dehydrogenase  YP_002279330  normal  0.263721  decreased coverage  0.00137707  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5411  CDS  NC_011368  1055648  1057168  +  1521  extracellular solute-binding protein family 5  YP_002279331  normal  0.253312  decreased coverage  0.00154474  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5427  CDS  NC_011368  1070802  1071251  -  450  pyridoxamine 5'-phosphate oxidase-related FMN-binding  YP_002279347  decreased coverage  0.0071751  hitchhiker  0.00705549  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5448  CDS  NC_011368  1092133  1093119  +  987  binding-protein-dependent transport systems inner membrane component  YP_002279367  normal  1  decreased coverage  0.00290712  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5504  CDS  NC_011368  1153922  1154914  +  993  flavin reductase domain protein FMN-binding  YP_002279421  normal  0.414218  decreased coverage  0.000482944  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5505  CDS  NC_011368  1154916  1156430  +  1515  Aldehyde Dehydrogenase  YP_002279422  normal  1  decreased coverage  0.000574808  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5506  CDS  NC_011368  1156470  1157546  +  1077  Luciferase-like monooxygenase  YP_002279423  normal  1  decreased coverage  0.000556535  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5510  CDS  NC_011368  1159779  1160753  +  975  polar amino acid ABC transporter, inner membrane subunit  YP_002279427  normal  0.442153  decreased coverage  0.000455607  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5511  CDS  NC_011368  1160750  1161493  +  744  ABC transporter related  YP_002279428  normal  0.233836  decreased coverage  0.000387504  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5512  CDS  NC_011368  1161655  1162152  -  498  transcriptional regulator, AsnC family  YP_002279429  normal  1  decreased coverage  0.00034471  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5513  CDS  NC_011368  1162253  1163638  +  1386  transcriptional regulator, GntR family with aminotransferase domain  YP_002279430  normal  0.412768  decreased coverage  0.00050533  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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Rleg2_5572  CDS  NC_011368  1218844  1218996  +  153  hypothetical protein  YP_002279488  decreased coverage  0.00798629  normal  1  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria 
 
 
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