Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5511 |
Symbol | |
ID | 6978605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1160750 |
End bp | 1161493 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643394610 |
Product | ABC transporter related |
Protein accession | YP_002279428 |
Protein GI | 209547510 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.233836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000387504 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACGGCG ACAAGATCAT TGAAGCGAAG CACGTTTCGA AGTGGTACGG CGCCTTTCAG GTGCTGAAGG ATATCAATCT CACTGTCAGC AAGGGCGAGC GGATCGTCGT CTGTGGTCCT TCGGGATCCG GCAAGTCAAC GCTGATCCGC TGCTTCAATC GGCTCGAAGC CCATCAGGAG GGGGAGATCA CCGTCAACGG CATCACCCTG CACAACAAGA TGCGCAATGT CGGCGAAGTC CGGAAGAATG TCGGCATGGT GTTCCAGCAC TTCAACCTCT TCCCGCATAT GACCGTGCTG ATGAACTGCA TGGTCGGGCC CATGTGGATC AAGGGTGTGC CGGCGGCCGA GGCGAAGAAG ACGGCGCTGA AATTCCTGGA GCGTGTGCGC ATCCCCGAAC AGGCCAACAA ATATCCGATC CAGCTGTCGG GCGGCCAGCA GCAGCGCGTC GCAATTGCCA GATCGCTTTG CATGCAGCCG GCTGTCATGC TGTTCGACGA GCCGACTTCG GCGCTTGATC CGGAAATGGT ATCGGAGGTA CTCGAAACCA TGACCGGTCT TGCCAAGGAC GGCATGACCA TGGTTTGCGT TACCCACGAA ATGGGCTTTG CGCGCGCCGT TGCGGACCGG GTGATCTTCA TGAACACAGG CCAGATCGTC GAGCAGGGCG TGCCCAAAGA ATTCTTCGAC AATCCGCAGC ATGAGCGGAC AAAGCTGTTC CTCAGTCAAA TCCTTAAGCA CTAG
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Protein sequence | MNGDKIIEAK HVSKWYGAFQ VLKDINLTVS KGERIVVCGP SGSGKSTLIR CFNRLEAHQE GEITVNGITL HNKMRNVGEV RKNVGMVFQH FNLFPHMTVL MNCMVGPMWI KGVPAAEAKK TALKFLERVR IPEQANKYPI QLSGGQQQRV AIARSLCMQP AVMLFDEPTS ALDPEMVSEV LETMTGLAKD GMTMVCVTHE MGFARAVADR VIFMNTGQIV EQGVPKEFFD NPQHERTKLF LSQILKH
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