Gene Rleg2_5408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5408 
Symbol 
ID6978502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1051769 
End bp1052959 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content65% 
IMG OID643394510 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002279328 
Protein GI209547410 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00119776 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTTGATC CCAATCGACG CACGATCCCC GCACAGCCGC CTAAGGCTGG CTTTGCGGCC 
GGTCCGGCCA AGCTGGACGC CATCCGATCG GTCACGCTGT CGCTCGCCTA TCTGCCGTTG
GCGCGGCCGA TCAGCGACGC CAAGGTTTTG ACCGGCCGGC AGAAGCCGCT GACGGAGGTG
GCGTTTCTGT TTTGCGAGAT CGTCTCCGAC GCTGGCCATA GCGGTCTCGG CTTCAGTTAC
TCGAAGCGGG CAGGCGGGCC AGCCCTTTAC GCACATGCCT GCGAGATTGC CGACAATCTG
ATCGGCGAAG ATCCCAACGA TACAGCGCGG ATATGGGACA AGCTCTGCTG GGCCGGCGCC
TCGGTCGGCC GTTCCGGCAT TGCGACACAG GCCATTGCCG CCATCGACAT CTGCCTTTGG
GACCTGAAGG CGAAACGCGC CGGCCTGCCG CTGGCCAAAC TGCTTGGCGC CCATCGCGAC
AGCGTCGCCT GCTACAACAC GTCGGGCGGC TTCCTTTCGT CGAGCGTCGA GGAAATCCGC
GATGCCATCG ATCACTCGAT CGCCTCCGGC ATCGGCGGCA TCAAGATCAA GGTCGGGCAG
CCGGACCCGA TGATCGATCT TCGCCGGCTC GATGCGGTGA CCAGCCATAT CGATGGCCGC
GTGCCGCTGA TGGTCGATGC CAACCAGCAA TGGGACCGCA CGACGGCGTT GCGCTTCGGC
CGGCTGGTCG AGCCGCTCAA TCTCGAATGG ATCGAAGAGC CGCTCGATGC CTATGACGCC
GAGGGCCATG CGGCACTGGC GCGTGAACTC GCCACACCAA TCGCCACCGG CGAGATGCTG
GCAAGCGCCG ACGAACATAT GGCCCTGATC CGTGCCGACG CGGTCGACTT CATCCAGCCG
GATGCGCCGC GGGTCGGGGG CATCACGCCC TTTCTGCGCA TCTGCACGCA AGCCGAGGCG
AAACGCATGC GGCTCGCGCC GCATTTCGCC ATGGAAATCC ATCTGCACTT GGCGGCCGCT
TATGCGCACG AGCCGTGGGT CGAGCATTTC GATTGGCTGG CGCCGCTGTT CAACGAACAG
CTCGATATTA GCGACGGCCG GATGATCGTG CCCGCCCGTC CGGGGCTTGG TTGCAGCCTG
ACGGGCAAAG CCCGTGACTG GACCGTGGAA ACGCGCAGCT TCGGCGGCTG A
 
Protein sequence
MFDPNRRTIP AQPPKAGFAA GPAKLDAIRS VTLSLAYLPL ARPISDAKVL TGRQKPLTEV 
AFLFCEIVSD AGHSGLGFSY SKRAGGPALY AHACEIADNL IGEDPNDTAR IWDKLCWAGA
SVGRSGIATQ AIAAIDICLW DLKAKRAGLP LAKLLGAHRD SVACYNTSGG FLSSSVEEIR
DAIDHSIASG IGGIKIKVGQ PDPMIDLRRL DAVTSHIDGR VPLMVDANQQ WDRTTALRFG
RLVEPLNLEW IEEPLDAYDA EGHAALAREL ATPIATGEML ASADEHMALI RADAVDFIQP
DAPRVGGITP FLRICTQAEA KRMRLAPHFA MEIHLHLAAA YAHEPWVEHF DWLAPLFNEQ
LDISDGRMIV PARPGLGCSL TGKARDWTVE TRSFGG