35 decreased-coverage genes were found for selected organism/s



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Locus tag
Gene type
Replicon accession
From
To
Strand
Gene Length
Product
Protein accession
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Organism name
Kingdom
Coverage Plot
PanDaTox homologs
Experimental validation
BMASAVP1_0124  CDS  NC_008784  117924  118187  +  264  IS407A, transposase OrfA  YP_989741  decreased coverage  0.00485388  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_0289  CDS  NC_008784  311287  311913  +  627  monooxygenase, truncation  YP_989900  decreased coverage  0.0090242  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_0292  CDS  NC_008784  313481  314545  -  1065  pyridine nucleotide-disulphide oxidoreductase, class II, truncation  YP_989903  decreased coverage  0.0048723  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_0631  rRNA  NC_008784  641099  642586  -  1488  16S ribosomal RNA    decreased coverage  0.00000000157639  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_0725  CDS  NC_008784  736611  736751  -  141  hypothetical protein  YP_990330  decreased coverage  0.0000000261434  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_1225  CDS  NC_008784  1230490  1230789  -  300  H-NS histone family protein  YP_990824  decreased coverage  0.000000000000571024  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_1226  CDS  NC_008784  1230822  1231010  -  189  hypothetical protein  YP_990825  decreased coverage  0.00000000000673178  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_1377  CDS  NC_008784  1361354  1362379  -  1026  AraC family transcriptional regulator  YP_990973  decreased coverage  0.00832504  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_1634  CDS  NC_008784  1600228  1602951  -  2724  2-oxoacid dehydrogenase subunit E1  YP_991228  decreased coverage  0.00000003166  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A0649  CDS  NC_008785  662275  663729  +  1455  major facilitator family transporter  YP_991995  decreased coverage  0.0060403  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A0942  CDS  NC_008785  938802  939575  +  774  hydrophobic amino acid ABC transporter ATP-binding protein  YP_992282  decreased coverage  0.00114272  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1194  CDS  NC_008785  1179841  1180749  -  909  hypothetical protein  YP_992529  decreased coverage  0.00865316  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1265  CDS  NC_008785  1241414  1242295  +  882  hypothetical protein  YP_992600  decreased coverage  0.00885366  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1266  CDS  NC_008785  1242673  1242909  +  237  glutathione S-transferase  YP_992601  decreased coverage  0.00947497  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1560  CDS  NC_008785  1534500  1535333  +  834  IS407A, transposase OrfB  YP_992886  decreased coverage  0.0000000677585  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1561  CDS  NC_008785  1535344  1535880  -  537  putative histidinol-phosphate aminotransferase  YP_992887  decreased coverage  0.00000000326314  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1596  CDS  NC_008785  1570483  1571667  +  1185  major facilitator family transporter  YP_992922  decreased coverage  0.00474308  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1597  CDS  NC_008785  1571787  1573352  +  1566  fenI protein  YP_992923  decreased coverage  0.0010634  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1598  CDS  NC_008785  1573431  1574156  -  726  precorrin-4 C11-methyltransferase  YP_992924  decreased coverage  0.00151458  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1770  CDS  NC_008785  1752474  1753865  -  1392  sigma-54 dependent transcriptional regulator  YP_993090  decreased coverage  0.000204714  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A1982  CDS  NC_008785  1959800  1960348  +  549  anti-oxidant AhpCTSA family protein  YP_993298  decreased coverage  0.00461398  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2039  CDS  NC_008785  2012877  2013692  +  816  hypothetical protein  YP_993355  decreased coverage  0.00000106552  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2316  CDS  NC_008785  2320381  2321976  -  1596  cobyric acid synthase  YP_993625  decreased coverage  0.0037254  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2334  CDS  NC_008785  2338465  2340138  +  1674  dihydroxy-acid dehydratase  YP_993643  decreased coverage  0.00290796  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2434  CDS  NC_008785  2428207  2429355  +  1149  putative amino acid ABC transporter, periplasmic amino acid-binding protein  YP_993739  decreased coverage  0.00891241  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2490  CDS  NC_008785  2475958  2476965  -  1008  RluA family pseudouridine synthase  YP_993794  decreased coverage  0.00000151813  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2503  CDS  NC_008785  2491765  2492022  +  258  ferredoxin  YP_993807  decreased coverage  0.000000000000452396  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A2504  tRNA  NC_008785  2492131  2492206  +  76  tRNA-Asn    decreased coverage  0.000000000000220613  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3168  CDS  NC_008785  3132758  3133378  -  621  50S ribosomal protein L4  YP_994455  decreased coverage  0.0000000000473803  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3169  CDS  NC_008785  3133378  3134037  -  660  50S ribosomal protein L3  YP_994456  decreased coverage  0.00000000000263976  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3184  CDS  NC_008785  3154540  3154920  -  381  preprotein translocase subunit SecE  YP_994471  decreased coverage  0.00000113463  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3186  CDS  NC_008785  3155098  3156288  -  1191  elongation factor Tu  YP_994472  decreased coverage  0.00000468547  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3208  CDS  NC_008785  3172786  3174018  +  1233  deoxyguanosinetriphosphate triphosphohydrolase-like protein  YP_994491  decreased coverage  0.00852958  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3400  CDS  NC_008785  3366059  3366703  +  645  metallo-beta-lactamase family protein  YP_994679  decreased coverage  0.00696268  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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BMASAVP1_A3452  CDS  NC_008785  3417783  3418931  +  1149  aminotransferase  YP_994730  decreased coverage  0.00530807  n/a    Burkholderia mallei SAVP1  Bacteria 
 
 
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