Gene BMASAVP1_A2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A2334 
SymbolilvD 
ID4681040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp2338465 
End bp2340138 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content67% 
IMG OID639846597 
Productdihydroxy-acid dehydratase 
Protein accessionYP_993643 
Protein GI121600757 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00290796 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTACA ACCGCCGCTC GAAGAACATC ACGCAAGGCG TGGCCCGTTC GCCGAACCGC 
TCGATGTATT ACGCGCTCGG CTATCAGAAG GAAGATTTCG ACAAGCCGAT GATCGGCATC
GCGAACGGCC ACTCGACGAT CACGCCGTGC AACGCGGGCC TGCAGCGTCT GTCGGACGCC
GCCGTCGCGG CCGTCAAGGA CGCCGGCGCG AATCCGCAGA TCTTCGGCAC GCCGACGATC
TCGGACGGCA TGTCGATGGG CACCGAAGGG ATGAAGTACT CGCTCGTGTC GCGCGAGGTG
ATCGCCGATT GCATCGAGAC CTGCGTGCAG GGCCAATGGA TGGACGGCGT CGTCGTCGTG
GGCGGCTGCG ACAAGAACAT GCCGGGCGGC ATGATCGCGC TCGCGCGGAT CAACGTGCCG
GGCATCTACG TGTACGGCGG CACGATCCGC CCCGGCCACT GGAAAGGCCA CGACCTGACG
ATCGTGTCGT CGTTCGAGGC GGTCGGCGAG TTCACCGCCG GACGCATGTC GCAGGAGGAT
TTCGAAGGGG TCGAAAAGAA CGCGTGCCCG ACGACGGGCT CGTGCGGCGG CATGTATACC
GCGAACACGA TGAGCTCGTC GTTCGAGGCG CTCGGCATGT CGCTGCTGTA CTCGTCGACG
ATGGCCAATC CCGATCAGGA GAAGGTCGAT TCGGCGGCGG AATCGGCGCG CGTGCTGGTC
GAGGCGGTGA AGAAGGACCT GAAGCCGCGC GACATCATCA CGAAGCAGTC GATCGAGAAC
GCGGTGTCGG TCATCATGGC CACGGGCGGC TCGACCAACG CGGTGCTCCA CTATCTGGCG
ATCGCGCACG CGGCCGAGAT CGACTGGTCG ATCGAGGATT TCGAGCGCAT CAGGAAGCGC
GTGCCGGTGA TTTGCGACCT GAAGCCGTCG GGCCAGTACG TCGCGACCGA TCTGCACGCG
GCGGGCGGCA TTCCGCAGGT GATGAAGCTG CTGCTCGACG CGGGCCTGCT GCACGGCGAC
TGCATGACGA TCACGGGCCG CACGCTCGCC GAGGAGCTGA AGGACGTGCC GAGCGTGCCG
CGCGCCGATC AGAAGGTGAT CCATCCGATC GACCAGGCGC TGTACAAGGA AGGCCACCTC
GCGATCCTGA AGGGCAACCT CGCCGAGGAC GGCGCGGTCG CGAAGATCAC CGGCCTGAAG
AACCCGGTCA TCACCGGCCC GGCGCGCGTG TTCGACGACG AGCAGAGCGC GCTCGCCGCG
ATCCTCGACG ACAGGATCCG CGCGGGCGAC GTCGTCGTGC TGCGCTACCT CGGCCCGCAA
GGCGGCCCGG GGATGCCCGA GATGCTCGCG CCGACATCGG CGATCATCGG CAAGGGCCTC
GGCGAATCGG TCGGCCTGAT CACCGACGGC CGCTTCTCCG GCGGCACGTG GGGGATGGTG
GTCGGCCACG TCGCGCCGGA AGCGTTCGTC GGCGGCACGA TCGCGCTCGT GCAGGAAGGC
GATTCGATCA CGATCGACGC GCACAAGCTG CTGCTGCAAT TGAACGTCGA CGACGCCGAA
CTCGCGCGCC GCCGCGCCGC ATGGAAGCAG CCGGCGCCGC GCTACACGCG CGGCGTGCTC
GCGAAGTACG CGGCGCTCGC CCGCCCGGCG AACCAGGGCG CCGTCACGGG CTGA
 
Protein sequence
MSYNRRSKNI TQGVARSPNR SMYYALGYQK EDFDKPMIGI ANGHSTITPC NAGLQRLSDA 
AVAAVKDAGA NPQIFGTPTI SDGMSMGTEG MKYSLVSREV IADCIETCVQ GQWMDGVVVV
GGCDKNMPGG MIALARINVP GIYVYGGTIR PGHWKGHDLT IVSSFEAVGE FTAGRMSQED
FEGVEKNACP TTGSCGGMYT ANTMSSSFEA LGMSLLYSST MANPDQEKVD SAAESARVLV
EAVKKDLKPR DIITKQSIEN AVSVIMATGG STNAVLHYLA IAHAAEIDWS IEDFERIRKR
VPVICDLKPS GQYVATDLHA AGGIPQVMKL LLDAGLLHGD CMTITGRTLA EELKDVPSVP
RADQKVIHPI DQALYKEGHL AILKGNLAED GAVAKITGLK NPVITGPARV FDDEQSALAA
ILDDRIRAGD VVVLRYLGPQ GGPGMPEMLA PTSAIIGKGL GESVGLITDG RFSGGTWGMV
VGHVAPEAFV GGTIALVQEG DSITIDAHKL LLQLNVDDAE LARRRAAWKQ PAPRYTRGVL
AKYAALARPA NQGAVTG