Gene BMASAVP1_A1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A1770 
Symbol 
ID4679199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp1752474 
End bp1753865 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content67% 
IMG OID639846035 
Productsigma-54 dependent transcriptional regulator 
Protein accessionYP_993090 
Protein GI121600476 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000204714 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACA CGAACGCAAT CGAAGGGCTC GATCTGTACG TCTGGGAGGG CAAGGCCGAT 
ATCGTCGACC GGGTCGCGCG CTGCATGTCG AGCTTCGACG TCGAAGTGAT CCGCGCGGAC
AACGAGGAAC TGTCGGCCGA ACGAACCGCG ATGCGGCCGT CGCTCGCGAT CATCAGCGTG
TCGATGATCG AGAGCGGCGC GGCGTTCCTG CGCACCTGGC AGGCGGAGAT CGGCATGCCG
GTGGTCTGGG TCGGCGCCGC GCGCGATCAC GATCCGTCGC TGTATCCGCC CGAGTATTCG
CACATCCTGC CGCTCGATTT CACGTGCGCG GAGCTGCGCG GCATGATCTC GAAGCTCGCG
GTGCAGTTGC GCGCGCACGC GGCGAAGGCG CTCGAGCCGA GCACGCTCGT CGCGCACTCG
GATTGCATGC AGGCGCTGTT GCAGGAAGTC GACACGTTCG CCGACTGCGA CACGAACGTG
CTGCTGCACG GCGAGACGGG CGTCGGCAAG GAGCGGATCG CGCAGCTGCT GCACGAGAAG
CACTCGCGCT ACGGCATGGG CGAGTTCGTG CCGGTGAACT GCGGCGCGAT TCCGGACGGA
CTGTTCGAGT CGCTCTTCTT CGGCCACGCG AAGGGCTCGT TCACGGGCGC GGTCGGCACG
CACAAGGGCT ACTTCGAGCA GGCGGCGGGC GGCACGCTGT TTCTCGACGA AGTGGGCGAT
CTGCCGCTCT ACCAGCAGGT GAAGCTGCTG CGCGTGCTCG AGGACGGCGC GGTGCTGCGC
ATCGGCGCGA CCGCGCCCGT CAAGGTGGAT TTCCGGCTCG TCGCGGCGAG CAACAAGAAA
CTGCCGCAGC TCGTGAAGGA CGGCCTGTTC CGCGCGGACC TATACTACCG GCTCGCGGTG
ATCGAGTTGA GCATTCCGTC GCTCGAGGAG CGCGGGCCCG TCGACAAGAT CGCGCTGTTC
AAGTCGTTCG TCGCGTCGAT CGTCGGCGAG GATCGGCTCG CCGCGCTGCC GGAGCTGCCT
TACTGGCTCG CCGAGGCGGT CGCCGATTCG TACTTCCCGG GCAACGTGCG CGAGCTGCGC
AACCTGGCCG AGCGCGTCGG CGTGACGGTG CGGCAGACGG GCGGCTGGGA TACCGTGCGG
CTGCAGCGGC TCATCGCGCA CGCGCGCAGC GCCGCGCAGC CGGCGCCGGC GGAGAGCGCG
CCCGACGTGT TCGTCGATCG CAGCAAATGG GACATGACCG AGCGCAATCG CGTGATCGCC
GCGCTTGACG CCAACGGTTG GCGTCGGCAG GATACCGCGC AGCATCTCGG AATCAGCCGC
AAGGTGCTGT GGGAAAAGAT GCGCAAGTAT CAGATTTTCG ACGAGGAGCC TGAGGCGCGG
GAAAGCGAAT GA
 
Protein sequence
MRNTNAIEGL DLYVWEGKAD IVDRVARCMS SFDVEVIRAD NEELSAERTA MRPSLAIISV 
SMIESGAAFL RTWQAEIGMP VVWVGAARDH DPSLYPPEYS HILPLDFTCA ELRGMISKLA
VQLRAHAAKA LEPSTLVAHS DCMQALLQEV DTFADCDTNV LLHGETGVGK ERIAQLLHEK
HSRYGMGEFV PVNCGAIPDG LFESLFFGHA KGSFTGAVGT HKGYFEQAAG GTLFLDEVGD
LPLYQQVKLL RVLEDGAVLR IGATAPVKVD FRLVAASNKK LPQLVKDGLF RADLYYRLAV
IELSIPSLEE RGPVDKIALF KSFVASIVGE DRLAALPELP YWLAEAVADS YFPGNVRELR
NLAERVGVTV RQTGGWDTVR LQRLIAHARS AAQPAPAESA PDVFVDRSKW DMTERNRVIA
ALDANGWRRQ DTAQHLGISR KVLWEKMRKY QIFDEEPEAR ESE