Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1982 |
Symbol | |
ID | 4678662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1959800 |
End bp | 1960348 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639846246 |
Product | anti-oxidant AhpCTSA family protein |
Protein accession | YP_993298 |
Protein GI | 121600102 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00461398 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACCG TGGGCGATAA ACTCGAAGCT TTCACCGTTG TGGCCGCGAA GCCGGGCTTC AACAATCACG AAGAAAACGG CCAGTCGGCA TTCGAGACCG TCACCGAAGC GTCGTTCCCG GGCAAGTGGA AGATCATCTA CTTCTACCCG AAGGACTTCA CGTTCGTCTG CCCGACGGAA ATCGTCGAAT TCGCGAAGCT CGCGAAGCAG TTCGAAGAGC GTGACGCCGT CCTGCTCGGC GGCAGCTCGG ACAACGAATT CGTCAAGCTC GCATGGCGCC GTGAGCACAA GGATCTCGAC AAGCTGAACC ACTACTCGTT CGGCGACGTC AAGGGCGAGC TGATCGACCA GCTCGGCGTG CGCGACAAGG AAGCGGGCGT CGCACTGCGC GCGACCTTCA TCGTCGATCC GGACAACACG ATCCAGCACG TGTCGGTGAA CAACCTGAAC GTCGGCCGCA GCCCGGAAGA AATCCTGCGC ATTCTCGACG GCCTGCAAAC GGACGAACTC TGCCCGTGCA ACCGCGCGAT CGGCGGCGCG ACGCTGTAA
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Protein sequence | MKTVGDKLEA FTVVAAKPGF NNHEENGQSA FETVTEASFP GKWKIIYFYP KDFTFVCPTE IVEFAKLAKQ FEERDAVLLG GSSDNEFVKL AWRREHKDLD KLNHYSFGDV KGELIDQLGV RDKEAGVALR ATFIVDPDNT IQHVSVNNLN VGRSPEEILR ILDGLQTDEL CPCNRAIGGA TL
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