Gene BMASAVP1_A3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A3400 
Symbol 
ID4681793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand+ 
Start bp3366059 
End bp3366703 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content68% 
IMG OID639847654 
Productmetallo-beta-lactamase family protein 
Protein accessionYP_994679 
Protein GI121601063 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00696268 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTCA CGCTCATTCC GGTCACGCCG TTCCAGCAGA ACTGCTCGCT GCTCGTTTGC 
GAAAAGACGG GACGCGCCGC CGTCGTCGAT CCGGGCGGCG ATCTCGAACT GATCGAGCAG 
GAGGTCGCCC GGCAGCACGT GCAGGTCGAG AAGGTGCTGC TCACGCACGG CCACGTCGAC 
CATTGCGCGG GCGCGAAGCG GCTCGCCGCG CATTACGGCG TGCCGATCGA GGGGCCGCAC 
GAAGACGAGC GCTTCTGGAT CGAAAAGCTG CCGATGCAAA GCGAGCGCTT CGGCTTTCCG 
GCGGCCGAAG CGTTCGAGCC GGACCGCTGG CTCGCCGACG GCGACACGCT CGCCTTCGGC 
GAGGAAACGC TCGAGGTCTA TCACTGCCCT GGGCACACGC CGGGCCACGT CGTATTCTTC 
AGCCGCGCGC ATCGGCTCGC GGTCGTCGGC GACGTGCTGT TCGCCGGTTC GATCGGCCGC 
ACCGACTTCC CGCGGGGCAA CCACGCGGAC CTGATCCGCT CGATCCGCGA AAAGCTCTGG 
CCGCTCGGCG ACGACGTCAC GTTCGTGCCC GGCCACGGCC CCGTGTCGAC GTTCGGCGAC 
GAGCGCCGCA CGAATCCGTT CGTCGCGGAC GGGGTGGCGG GATGA
 
Protein sequence
MKVTLIPVTP FQQNCSLLVC EKTGRAAVVD PGGDLELIEQ EVARQHVQVE KVLLTHGHVD 
HCAGAKRLAA HYGVPIEGPH EDERFWIEKL PMQSERFGFP AAEAFEPDRW LADGDTLAFG 
EETLEVYHCP GHTPGHVVFF SRAHRLAVVG DVLFAGSIGR TDFPRGNHAD LIRSIREKLW 
PLGDDVTFVP GHGPVSTFGD ERRTNPFVAD GVAG