Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1597 |
Symbol | |
ID | 4681391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1571787 |
End bp | 1573352 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639845864 |
Product | fenI protein |
Protein accession | YP_992923 |
Protein GI | 121601490 |
COG category | [S] Function unknown |
COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0010634 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGTCGA CCCGACTTCG CCATCTCGCC GCGGCCGCAC TCGTGCTGTC GGCCAGCGCA TGCGCGTCAT CGCCGCAGGC CGTGCCCGAA GTCGCGTGCC GGCCGGACGA GACGATGCCC AAGCGTCAGT TCCGCGGCAC CTGGATCGCC TCGGTGATCA ACCTCGACTG GCCGTCGCGC CCGGGCCTGC CGGCCGCCGC GCAGCAGGCC GAGCTGAGCG CGTGGCTCGA CGACGCGGTC CGGATGAACC GCAACGCGGT GATCCTGCAG GTTCGGCCGA CCGCGGACGC ATTCTGGCCG TCGCCGTTCG AGCCGTGGTC GAAATATCTG ACGGGCGCGC AAGGCGGCGA TCCCGGCTAC GATCCGCTCG CGTTCGCCGT CGCCGAAGCG CATCGGCGCA ATCTCGAGCT GCACGCGTGG TTCAATCCGT ACCGCGTCGC GATGGACGAC CGGCTCGACG CGCTCGTCGC CACGCATCCG GCGCGCGCGC ATCCGGACTG GGTGGTCCGC TACGGCGGCA AGCTGTATTA CAACCCCGGC GTGCCCGCCG CGCGCGCGTT CGTCGTCGAC GCGATCATGG ACGCGGTCGC CCGCTACGAT ATCGACGCCG TGCATCTCGA CGATTATTTC TACCCGTACC CGGTCGCGGG CGCGACGTTC GACGACGCCT CGGCTTATGC GCAATACGGC GCGGGTTTCG CGACGCTCGC CGACTGGCGT CGCGACAACG TCGATCGTCT CGTCGAATCG CTCGCGCGGC GCATCAAGGC CGCGAAACCG TGGGTGAAGT TCGGGATCTC GCCGTTCGCG GTCTGGCGCA ATGCGGCGAC CGATCCGCAG GGCTCGCGGA CGTCGGCTTC GGTGCAGACC TACGACGACC TTTACGCGGA CACGCGCCGC TGGGTGCGCG AGCGCTGGAT CGACTATGTC GTTCCGCAGG CGTACTGGGC GCGGGGCTTC GCGCCCGCCG ATTACGACGA GGTCGTGGCG TGGTGGGCCA ACGAAGTGCG CGGGCGCGAC GCGCACCTGT ACATCGGGCA GGCGGCGTAC AAGGTCGGCA CGTCGAATCA ATCGCCCGGC TGGTCCGATC CCGACGAGCT GAGCCGCCAT CTGGCGTTCA ATCTCACCGC GCCCGAGGTG AAGGGCGACG TCTACTTCTC GGCGAAGGAC GTGCGCGCGG ACCGGCTCGG CGCGACGACG CGCTTGAACC GCACCTGGTA TTCGCGCCCG GCGCTCGTGC CCACGATGCC CGCGCTCGGC GGCAACGCGC CGCCGAGCGC GAAGGCGCTG CGCGCGCAAC GCACGCCTGA CGGCGTGCGG CTGCAATGGC AGGCGGGCTC GGCCGCGGCG GCGTCGTACG CGGTCTATCG CCACGCGCTC GGGCGACAGG ACATGTGCGC GGACAGCGAC GCGCGCCATC TGCTGGCGAT GGTTCGGGGC ACGCAATACG TCGACGTCAC CGCGCGCGCG GATCGCGACT ACCGGTACGT GGTCACGGCG CTCGATCGCC TGTGGCACGA GAGCGAACCC GCGTACGTCG CGATGCCGGC GGCGAAGCCG CGCTGA
|
Protein sequence | MLSTRLRHLA AAALVLSASA CASSPQAVPE VACRPDETMP KRQFRGTWIA SVINLDWPSR PGLPAAAQQA ELSAWLDDAV RMNRNAVILQ VRPTADAFWP SPFEPWSKYL TGAQGGDPGY DPLAFAVAEA HRRNLELHAW FNPYRVAMDD RLDALVATHP ARAHPDWVVR YGGKLYYNPG VPAARAFVVD AIMDAVARYD IDAVHLDDYF YPYPVAGATF DDASAYAQYG AGFATLADWR RDNVDRLVES LARRIKAAKP WVKFGISPFA VWRNAATDPQ GSRTSASVQT YDDLYADTRR WVRERWIDYV VPQAYWARGF APADYDEVVA WWANEVRGRD AHLYIGQAAY KVGTSNQSPG WSDPDELSRH LAFNLTAPEV KGDVYFSAKD VRADRLGATT RLNRTWYSRP ALVPTMPALG GNAPPSAKAL RAQRTPDGVR LQWQAGSAAA ASYAVYRHAL GRQDMCADSD ARHLLAMVRG TQYVDVTARA DRDYRYVVTA LDRLWHESEP AYVAMPAAKP R
|
| |