Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A3452 |
Symbol | |
ID | 4678863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 3417783 |
End bp | 3418931 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639847705 |
Product | aminotransferase |
Protein accession | YP_994730 |
Protein GI | 121601465 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00530807 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAC TGCCGCTGCG CGCCGTCGAA CCGTGGATCG ACGAGCGCAT CTTTGTCACC CAACCGCATC TCGCGCCGCT CGCCGAATTC CTGCCTTATC TCGAGGCGAT CTGGGAAAGC AAGGTGCTGA CGAACGGCGG GCCGTTTCAT CAGCAGCTCG AGAAGGCGCT GTGCGACTAC CTCGGCGTGC GTCACCTCGC GCTCTTCACG AACGGCACGC TCGCGCTCGT CACGGCGCTT CAGGCGCTGC GCATCACGGG CGAAGTGATC ACGACGCCGT ATTCGTTCGT CGCGACCGCG CACTCGCTGC TGTGGAACGG GATCAAGCCG GTGTTCGTCG ACATCGATCC GAGCACGCTG AATCTCGATC CCGCGAAGAT CGAGGCGGCG ATCACGCCGC AGACGACCGC GATCATGCCC GTGCACTGCT ATGGCCGGCC GTGCGACGTC GCCGCGATCC AGAAAATCGC CGACAACTAC AATCTGAAGG TGATCTATGA CGCCGCGCAT GCATTCGGCG TGAAGACGCC CGACGGCAGC GTGCTCGAGC ACGGCGACAT GTCGATCCTG AGCTTTCACG CGACGAAGGT GTTCAACACG TTCGAAGGCG GCGCGATCGT CTGCCCGGAC GCGAAGACGA AGCAGCACAT CGATCACCTG AAGAACTTCG GCTTCGTCGA CGAAGTCACC GTCGTCGCGG CGGGAATCAA CGGCAAGATG AGCGAGATCA ACGCGGCATT CGGTCTGCTG CAGCTCAAGC ACATCGACGA TGCGCTCGCG CGCCGCGCGA AGATCGACGC CGCATACCGC GACGCGCTCG CCCGCGTGCC CGGCATCCGT TGCCTGCCGC CCGTCGACGC GCCGGTCGCG AATCATTCGT ACTTCCCGAT TCTCGTCGGC GACGACTACC CGATGAGTCG CGACGCGCTG TACCAGCGCC TGCGCGACCA CCAGATCTAC GCACGCCGCT ATTTCTACCC GCTCATCTCC GATTTCCCGA TGTATCGCGG GCTGCCGTCC GCGCAGCGCG GCAATCTGCC CGTCGCCGCC GACGCCGCCG CGCGCGTGCT GTGCCTGCCG ATCTATCCGG CGCTGTCCGA TGCATCGCTC GAGCGAATCG TATCGCTGAT GGCGGGAGCG CATGCATGA
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Protein sequence | MSALPLRAVE PWIDERIFVT QPHLAPLAEF LPYLEAIWES KVLTNGGPFH QQLEKALCDY LGVRHLALFT NGTLALVTAL QALRITGEVI TTPYSFVATA HSLLWNGIKP VFVDIDPSTL NLDPAKIEAA ITPQTTAIMP VHCYGRPCDV AAIQKIADNY NLKVIYDAAH AFGVKTPDGS VLEHGDMSIL SFHATKVFNT FEGGAIVCPD AKTKQHIDHL KNFGFVDEVT VVAAGINGKM SEINAAFGLL QLKHIDDALA RRAKIDAAYR DALARVPGIR CLPPVDAPVA NHSYFPILVG DDYPMSRDAL YQRLRDHQIY ARRYFYPLIS DFPMYRGLPS AQRGNLPVAA DAAARVLCLP IYPALSDASL ERIVSLMAGA HA
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