More than 300 homologs were found in PanDaTox collection
for query gene Tbd_1175 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_1175  glucose-1-phosphate adenylyltransferase  100 
 
 
408 aa  842    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2982  glucose-1-phosphate adenylyltransferase  55.53 
 
 
435 aa  455  1e-127  Acidovorax citrulli AAC00-1  Bacteria  normal  0.487954  normal  0.0305335 
 
 
-
 
NC_010644  Emin_0063  glucose-1-phosphate adenylyltransferase  46.21 
 
 
403 aa  388  1e-107  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.000122298 
 
 
-
 
NC_013946  Mrub_0349  glucose-1-phosphate adenylyltransferase  44.39 
 
 
413 aa  368  1e-101  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0118  glucose-1-phosphate adenylyltransferase  46.63 
 
 
413 aa  365  1e-100  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0107  glucose-1-phosphate adenylyltransferase  46.63 
 
 
413 aa  365  1e-99  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0100  glucose-1-phosphate adenylyltransferase  46.38 
 
 
413 aa  363  4e-99  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0900911  n/a   
 
 
-
 
NC_014212  Mesil_0806  glucose-1-phosphate adenylyltransferase  44.39 
 
 
413 aa  361  1e-98  Meiothermus silvanus DSM 9946  Bacteria  normal  0.462014  normal 
 
 
-
 
NC_009675  Anae109_0101  glucose-1-phosphate adenylyltransferase  44.61 
 
 
411 aa  352  8.999999999999999e-96  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.495793  normal  0.0768686 
 
 
-
 
NC_013440  Hoch_5800  glucose-1-phosphate adenylyltransferase  44.08 
 
 
423 aa  348  9e-95  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1120  glucose-1-phosphate adenylyltransferase  45.5 
 
 
406 aa  348  1e-94  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.366661  n/a   
 
 
-
 
NC_008025  Dgeo_0861  glucose-1-phosphate adenylyltransferase  44.14 
 
 
413 aa  347  2e-94  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.506105  normal  0.404079 
 
 
-
 
NC_012803  Mlut_11680  glucose-1-phosphate adenylyltransferase  44.5 
 
 
414 aa  347  2e-94  Micrococcus luteus NCTC 2665  Bacteria  normal  0.743389  n/a   
 
 
-
 
NC_013456  VEA_003947  glucose-1-phosphate adenylyltransferase  41.81 
 
 
405 aa  345  1e-93  Vibrio sp. Ex25  Bacteria  normal  0.870453  n/a   
 
 
-
 
NC_009783  VIBHAR_01575  glucose-1-phosphate adenylyltransferase  41.81 
 
 
405 aa  341  1e-92  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_6262  glucose-1-phosphate adenylyltransferase  46.08 
 
 
408 aa  340  2e-92  Streptosporangium roseum DSM 43021  Bacteria  normal  0.674853  normal  0.0584137 
 
 
-
 
NC_009457  VC0395_A1330  glucose-1-phosphate adenylyltransferase  41.31 
 
 
405 aa  339  5e-92  Vibrio cholerae O395  Bacteria  normal  0.0374066  n/a   
 
 
-
 
NC_014165  Tbis_2113  glucose-1-phosphate adenylyltransferase  45.57 
 
 
408 aa  333  3e-90  Thermobispora bispora DSM 43833  Bacteria  normal  0.696559  normal 
 
 
-
 
NC_011313  VSAL_II0238  glucose-1-phosphate adenylyltransferase  41.71 
 
 
418 aa  331  1e-89  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_2140  glucose-1-phosphate adenylyltransferase  41.36 
 
 
465 aa  328  1.0000000000000001e-88  Arthrobacter sp. FB24  Bacteria  normal  0.782934  n/a   
 
 
-
 
NC_013522  Taci_0541  glucose-1-phosphate adenylyltransferase  42.57 
 
 
429 aa  325  1e-87  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0906  glucose-1-phosphate adenylyltransferase  41.79 
 
 
413 aa  323  2e-87  Geobacter bemidjiensis Bem  Bacteria  normal  0.826098  n/a   
 
 
-
 
NC_012918  GM21_3355  glucose-1-phosphate adenylyltransferase  42.03 
 
 
413 aa  323  4e-87  Geobacter sp. M21  Bacteria  n/a    normal  0.548111 
 
 
-
 
NC_008709  Ping_3034  glucose-1-phosphate adenylyltransferase  41.35 
 
 
407 aa  322  7e-87  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_1887  glucose-1-phosphate adenylyltransferase  41.67 
 
 
470 aa  322  9.000000000000001e-87  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00088107 
 
 
-
 
NC_010814  Glov_1543  glucose-1-phosphate adenylyltransferase  41.25 
 
 
413 aa  321  1.9999999999999998e-86  Geobacter lovleyi SZ  Bacteria  decreased coverage  0.00354872  n/a   
 
 
-
 
NC_007777  Francci3_1667  glucose-1-phosphate adenylyltransferase  43.11 
 
 
412 aa  321  1.9999999999999998e-86  Frankia sp. CcI3  Bacteria  normal  0.395811  normal 
 
 
-
 
NC_009077  Mjls_4230  glucose-1-phosphate adenylyltransferase  43.77 
 
 
404 aa  320  3e-86  Mycobacterium sp. JLS  Bacteria  normal  normal  0.185443 
 
 
-
 
NC_008146  Mmcs_4000  glucose-1-phosphate adenylyltransferase  43.51 
 
 
404 aa  320  3.9999999999999996e-86  Mycobacterium sp. MCS  Bacteria  normal  0.222543  n/a   
 
 
-
 
NC_008705  Mkms_4074  glucose-1-phosphate adenylyltransferase  43.51 
 
 
404 aa  320  3.9999999999999996e-86  Mycobacterium sp. KMS  Bacteria  normal  0.058709  normal 
 
 
-
 
NC_009921  Franean1_2092  glucose-1-phosphate adenylyltransferase  44.25 
 
 
413 aa  319  6e-86  Frankia sp. EAN1pec  Bacteria  normal  normal  0.798196 
 
 
-
 
NC_009338  Mflv_2193  glucose-1-phosphate adenylyltransferase  44.68 
 
 
404 aa  317  2e-85  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.992249 
 
 
-
 
NC_008699  Noca_3717  glucose-1-phosphate adenylyltransferase  43.11 
 
 
415 aa  317  2e-85  Nocardioides sp. JS614  Bacteria  normal  0.609099  n/a   
 
 
-
 
NC_008726  Mvan_4503  glucose-1-phosphate adenylyltransferase  44.68 
 
 
404 aa  317  2e-85  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11237  glucose-1-phosphate adenylyltransferase  44.68 
 
 
404 aa  315  9.999999999999999e-85  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000384195  normal  0.0353378 
 
 
-
 
NC_008709  Ping_3033  glucose-1-phosphate adenylyltransferase  42.5 
 
 
409 aa  315  9.999999999999999e-85  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2768  glucose-1-phosphate adenylyltransferase  41.01 
 
 
412 aa  313  1.9999999999999998e-84  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2901  glucose-1-phosphate adenylyltransferase  41.1 
 
 
415 aa  314  1.9999999999999998e-84  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.218229  normal  0.117414 
 
 
-
 
NC_008578  Acel_1821  glucose-1-phosphate adenylyltransferase  43.86 
 
 
414 aa  311  1e-83  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.159993 
 
 
-
 
NC_009784  VIBHAR_05944  glucose-1-phosphate adenylyltransferase  39.1 
 
 
404 aa  308  2.0000000000000002e-82  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009456  VC0395_0637  glucose-1-phosphate adenylyltransferase  40.15 
 
 
407 aa  305  8.000000000000001e-82  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_1690  Glucose-1-phosphate adenylyltransferase  41.09 
 
 
413 aa  305  8.000000000000001e-82  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0794  glucose-1-phosphate adenylyltransferase  41.9 
 
 
406 aa  305  1.0000000000000001e-81  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1106  glucose-1-phosphate adenylyltransferase  39.95 
 
 
421 aa  304  2.0000000000000002e-81  Halorhodospira halophila SL1  Bacteria  normal  0.495993  n/a   
 
 
-
 
NC_013530  Xcel_1420  glucose-1-phosphate adenylyltransferase  40.55 
 
 
413 aa  304  2.0000000000000002e-81  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1474  glucose-1-phosphate adenylyltransferase  39.39 
 
 
424 aa  300  2e-80  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0600  glucose-1-phosphate adenylyltransferase  39.45 
 
 
414 aa  301  2e-80  Bifidobacterium longum DJO10A  Bacteria  normal  0.910343  n/a   
 
 
-
 
NC_009438  Sputcn32_1251  glucose-1-phosphate adenylyltransferase  38.73 
 
 
420 aa  300  3e-80  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2073  glucose-1-phosphate adenylyltransferase  39.22 
 
 
421 aa  300  4e-80  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.755782  n/a   
 
 
-
 
NC_008340  Mlg_0959  glucose-1-phosphate adenylyltransferase  39.69 
 
 
422 aa  299  5e-80  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.256851 
 
 
-
 
NC_007947  Mfla_1368  glucose-1-phosphate adenylyltransferase  39.09 
 
 
427 aa  298  2e-79  Methylobacillus flagellatus KT  Bacteria  normal  0.782994  normal 
 
 
-
 
NC_013441  Gbro_3305  glucose-1-phosphate adenylyltransferase  41.01 
 
 
404 aa  296  3e-79  Gordonia bronchialis DSM 43247  Bacteria  normal  0.4162  n/a   
 
 
-
 
NC_009052  Sbal_1334  glucose-1-phosphate adenylyltransferase  39.1 
 
 
420 aa  295  7e-79  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_2838  glucose-1-phosphate adenylyltransferase  38.38 
 
 
435 aa  295  7e-79  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2931  glucose-1-phosphate adenylyltransferase  38.23 
 
 
420 aa  295  8e-79  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_1498  glucose-1-phosphate adenylyltransferase  38.23 
 
 
420 aa  295  1e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_3935  glucose-1-phosphate adenylyltransferase  39.9 
 
 
425 aa  295  1e-78  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1172  glucose-1-phosphate adenylyltransferase  39.5 
 
 
412 aa  295  1e-78  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.107881 
 
 
-
 
NC_013889  TK90_1529  glucose-1-phosphate adenylyltransferase  39.07 
 
 
421 aa  294  2e-78  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.000116874 
 
 
-
 
NC_009092  Shew_1171  glucose-1-phosphate adenylyltransferase  36.71 
 
 
424 aa  294  2e-78  Shewanella loihica PV-4  Bacteria  normal  normal  0.591039 
 
 
-
 
NC_009665  Shew185_1324  glucose-1-phosphate adenylyltransferase  38.85 
 
 
420 aa  294  2e-78  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1175  glucose-1-phosphate adenylyltransferase  41.48 
 
 
427 aa  294  2e-78  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2755  glucose-1-phosphate adenylyltransferase  37.97 
 
 
420 aa  294  2e-78  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2833  glucose-1-phosphate adenylyltransferase  37.97 
 
 
420 aa  294  2e-78  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3024  glucose-1-phosphate adenylyltransferase  38.85 
 
 
420 aa  294  2e-78  Shewanella baltica OS223  Bacteria  normal  0.823168  normal 
 
 
-
 
NC_013422  Hneap_0776  glucose-1-phosphate adenylyltransferase  37.97 
 
 
423 aa  293  3e-78  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1360  glucose-1-phosphate adenylyltransferase  38.85 
 
 
420 aa  293  4e-78  Shewanella baltica OS195  Bacteria  normal  normal  0.279951 
 
 
-
 
NC_013421  Pecwa_4134  glucose-1-phosphate adenylyltransferase  39.75 
 
 
425 aa  293  4e-78  Pectobacterium wasabiae WPP163  Bacteria  normal  0.527563  n/a   
 
 
-
 
NC_007614  Nmul_A0718  glucose-1-phosphate adenylyltransferase  38.2 
 
 
425 aa  293  5e-78  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.917503  n/a   
 
 
-
 
NC_008340  Mlg_0655  glucose-1-phosphate adenylyltransferase  38.73 
 
 
423 aa  293  5e-78  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.188651  normal  0.102422 
 
 
-
 
NC_008228  Patl_2932  glucose-1-phosphate adenylyltransferase  38.64 
 
 
420 aa  292  6e-78  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00275218  n/a   
 
 
-
 
NC_013172  Bfae_15870  glucose-1-phosphate adenylyltransferase  39.3 
 
 
413 aa  293  6e-78  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0214399  n/a   
 
 
-
 
NC_011206  Lferr_2459  glucose-1-phosphate adenylyltransferase  38.13 
 
 
435 aa  292  7e-78  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_000209  glucose-1-phosphate adenylyltransferase  37.53 
 
 
405 aa  292  7e-78  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3485  nucleotidyl transferase  38.65 
 
 
435 aa  292  8e-78  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.512437  normal  0.248933 
 
 
-
 
NC_013235  Namu_2153  glucose-1-phosphate adenylyltransferase  42.89 
 
 
406 aa  292  9e-78  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000824588  hitchhiker  0.00511814 
 
 
-
 
NC_008789  Hhal_1864  glucose-1-phosphate adenylyltransferase  39.24 
 
 
423 aa  291  1e-77  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1691  glucose-1-phosphate adenylyltransferase  36.95 
 
 
416 aa  291  2e-77  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.620576  n/a   
 
 
-
 
NC_011138  MADE_02421  glucose-1-phosphate adenylyltransferase  39.49 
 
 
431 aa  291  2e-77  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.962806  n/a   
 
 
-
 
NC_007298  Daro_0585  glucose-1-phosphate adenylyltransferase  38.99 
 
 
440 aa  290  3e-77  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.920968 
 
 
-
 
NC_008700  Sama_2450  glucose-1-phosphate adenylyltransferase  38.23 
 
 
422 aa  290  3e-77  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21740  glucose-1-phosphate adenylyltransferase  38.56 
 
 
412 aa  290  4e-77  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_2162  glucose-1-phosphate adenylyltransferase  37.97 
 
 
420 aa  290  4e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.482647  n/a   
 
 
-
 
NC_012669  Bcav_2318  glucose-1-phosphate adenylyltransferase  38.25 
 
 
423 aa  289  6e-77  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.300478  normal 
 
 
-
 
NC_008009  Acid345_1020  glucose-1-phosphate adenylyltransferase  38.44 
 
 
417 aa  289  8e-77  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0841522  normal 
 
 
-
 
NC_007912  Sde_0990  glucose-1-phosphate adenylyltransferase  37.22 
 
 
425 aa  288  2e-76  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.588268 
 
 
-
 
NC_008709  Ping_1296  glucose-1-phosphate adenylyltransferase  37.22 
 
 
426 aa  287  2e-76  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1433  glucose-1-phosphate adenylyltransferase  38.19 
 
 
421 aa  288  2e-76  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2061  glucose-1-phosphate adenylyltransferase  38.61 
 
 
439 aa  286  5e-76  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.518394 
 
 
-
 
NC_012880  Dd703_0279  glucose-1-phosphate adenylyltransferase  38.38 
 
 
427 aa  283  3.0000000000000004e-75  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0508  glucose-1-phosphate adenylyltransferase  37.97 
 
 
422 aa  282  7.000000000000001e-75  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0225  glucose-1-phosphate adenylyltransferase  38.38 
 
 
428 aa  282  7.000000000000001e-75  Dickeya zeae Ech1591  Bacteria  normal  0.832621  n/a   
 
 
-
 
NC_010622  Bphy_1797  glucose-1-phosphate adenylyltransferase  39.29 
 
 
422 aa  281  1e-74  Burkholderia phymatum STM815  Bacteria  normal  0.477582  normal  0.903839 
 
 
-
 
NC_008576  Mmc1_1522  glucose-1-phosphate adenylyltransferase  38.73 
 
 
425 aa  280  4e-74  Magnetococcus sp. MC-1  Bacteria  normal  0.0158195  normal 
 
 
-
 
NC_007484  Noc_0905  glucose-1-phosphate adenylyltransferase  37.5 
 
 
423 aa  279  6e-74  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.693448  n/a   
 
 
-
 
NC_010681  Bphyt_1543  glucose-1-phosphate adenylyltransferase  37.78 
 
 
420 aa  279  8e-74  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2934  glucose-1-phosphate adenylyltransferase  37.78 
 
 
421 aa  278  1e-73  Burkholderia xenovorans LB400  Bacteria  normal  0.17084  normal  0.531544 
 
 
-
 
NC_008228  Patl_2084  glucose-1-phosphate adenylyltransferase  34.68 
 
 
439 aa  277  2e-73  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_3712  glucose-1-phosphate adenylyltransferase  36.62 
 
 
431 aa  276  3e-73  Escherichia coli SMS-3-5  Bacteria  normal  0.499827  normal  0.460208 
 
 
-
 
NC_009801  EcE24377A_3909  glucose-1-phosphate adenylyltransferase  36.62 
 
 
431 aa  276  3e-73  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
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