| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0990 |
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| Symbol | glgC |
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| ID | 3966232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1268019 |
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| End bp | 1269296 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920057 |
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| Product | glucose-1-phosphate adenylyltransferase |
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| Protein accession | YP_526464 |
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| Protein GI | 90020637 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.588268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGACC CGAATTCACG CTATGTTAGT CGTTTAACCC GCGATACAGT AGCATTAGTG
TTAGCGGGTG GCCGCGGGAG CCGCCTACAC GAACTAACAG ATTGGAGGGC AAAGCCAGCA
CTGCATTTTG GCGGAAAGTT TAGAATTATT GATTTTCCAC TATCCAATTG CGTCAATTCG
GGCATCCGTC GTATAGGTAT CCTAACTCAA TATAAAGCGC ACTCGCTTAT TCGCCATGTA
ATTCGCGGTT GGAGCTCGTT TAAAAAAGAG TTTGGTGAAT ATGTAGAAAT ATTACCTGCC
TCGCAGCGTT ATTCTCCTAA CTGGTATCAG GGCACAGCCG ATGCGATTTA TCAAAACTTA
GATATTCTAC AAGCCGAAGC GCCAAAATAT ATTTTGGTGC TGTCTGGCGA TCACGTATAT
CAAATGGACT ACGGTGCAAT TATTGCGCAC CATGTTGAAA CAGGCGCAGA TTTAACTGTG
TCTTGTATCG AAGTACCCAT TGAAGAAGCG GCCGGCTCGT TTGGTGTAAT GACCGTAGAC
GATGACAACC GCATTATTCG TTTTGATGAA AAGCCTCAGC GCCCAACCGA GTTGGCAAAT
AAACCCGGTT ACACCTTGGC TTCTATGGGT AACTATGTGT TTAACACCGA GTTCCTATTT
GACCAATTGC GTAAAGATGC CGCCGACCCA GATTCTGAAC ACGACTTTGG CAAAAATATT
ATTCCAAACA TTATTGCCGA AAAATTAGTT TCTGCTTACC GTTTTCGCGA TCACGATACC
AACGAAACGG CCTACTGGCG CGATGTAGGT ACCTTGGATT CCTTCTGGGA AGCCAATATG
GAATTGGTTT CGCCTAACCC TTCGCTAAAC CTCTACAATC ACGACTGGCC AATTTGGACT
TATCAAACTC AGTTGCCGCC AGCAAAATTT GTATTCGATG ACGATTCGAG AAGAGGCTAC
GCCGTCGACT CTATGGTGTC GGGTGGCTGT ATTGTTTCTG GGGGCAAAGT TAAGAGTTCA
CTTTTATTTT CTGATGTGCA TATTCATTCC TATGCAGAAA TAGAAGAATC TGTTTTGTTA
CCCGAAGTAG AAGTACATCG CAGTGCTAAA ATTAAAAAAG CCATTATTGA TAGTGCGTGT
GTGATTCCCG AGGGCATGAT TATTGGGCAC GATCACGAGC ACGATAAGGC GCGCGGCTTT
CGTGTAACGA AAAAAGGCGT TACGTTGGTA ACACGAGAAA TGCTTGGTCA GCAACCTGCG
GGTACGTCAG CGAAATAA
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| Protein sequence | MLDPNSRYVS RLTRDTVALV LAGGRGSRLH ELTDWRAKPA LHFGGKFRII DFPLSNCVNS
GIRRIGILTQ YKAHSLIRHV IRGWSSFKKE FGEYVEILPA SQRYSPNWYQ GTADAIYQNL
DILQAEAPKY ILVLSGDHVY QMDYGAIIAH HVETGADLTV SCIEVPIEEA AGSFGVMTVD
DDNRIIRFDE KPQRPTELAN KPGYTLASMG NYVFNTEFLF DQLRKDAADP DSEHDFGKNI
IPNIIAEKLV SAYRFRDHDT NETAYWRDVG TLDSFWEANM ELVSPNPSLN LYNHDWPIWT
YQTQLPPAKF VFDDDSRRGY AVDSMVSGGC IVSGGKVKSS LLFSDVHIHS YAEIEESVLL
PEVEVHRSAK IKKAIIDSAC VIPEGMIIGH DHEHDKARGF RVTKKGVTLV TREMLGQQPA
GTSAK
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