| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2162 |
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| Symbol | glgC |
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| ID | 4279074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2578255 |
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| End bp | 2579517 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134952 |
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| Product | glucose-1-phosphate adenylyltransferase |
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| Protein accession | YP_750846 |
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| Protein GI | 114563333 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.482647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA TTCGTTATAT TAGTAATTTA ACCCGTGATA CCTATGCGTT GATTTTAGCG
GGTGGACGTG GTTCACGCTT GTACGAATTA ACCGATTGGC GCGCTAAGCC CGCACTATAT
TTTGGGGGGA AATATCGCAT TATTGATTTT CCATTATCAA ACTGTATTAA CTCAGGAATA
CGCCGCGTGG GGGTGGTGAC ACAATATAAG TCGCATTCAT TAATTCGTCA TGTTACTCGT
GGCTGGGGAC ATTTTAAAAA AGAGCTAGGG GAGTCGGTTG AAATACTACC GGCTTCTCAA
CAAACATCAG GTAACTGGTA TCAAGGTACT GCAGATGCCG TATTCCAAAA TATTGATATT
ATTAGACAGG AAATTCCGAA ATATGTGATG ATCCTATCTG GTGACCATAT ATATCGTATG
GACTATGCCG GCTTGTTAGC TGCCCATGCA GAATCAGGTG CTGAAATGAC GGTGTGCTGT
TTAGAAACAC CTATTGATGA AGCCGCTGGA GCTTTTGGGG TGATGGAAGT TGATAGCGAG
CATCGGGTGA TTGGCTTTGA AGAAAAACCA GCTGAGCCTA AATCGATACC AAGCGATCCA
ACAATGTGTT TAGCTTCTAT GGGCAACTAT GTATTCAACA CTAAGTTTTT ATTTGAACAG
TTAAAAAAAG ATGCCAATAA CGAAAAATCA GATCGTGACT TTGGCAAAGA CATCATTCCA
GCCATTATTG AAAATCACAA AGTGTTTGCA TTTCCATTTT CCAGTGCGGT TGCTGGACAA
CCTTCATATT GGCGTGATGT TGGGACATTA GATTCGTTTT TTCAAGCAAA CATGGAACTG
TTATTACCCA CACCACCACT CAACCTTTAT GATGCAAAGT GGCCAATTTG GACCTATCAA
GAGCAGTTAC CACCCGCTAA ATTTGTGTTT GATGATGATG ATAGGCGCGG TATGGCTGTG
GACTCTATCG TTTCCGGTGG CTGTATTATT TCAGGTGCTA AAGTTAAACG TTGTGTGTTG
TTTGATGAAG TGAGGGTATG TTCTTATTCG TTTGTAAAAG ACTCGGTTTT ATTACCCGAT
GTGGTGGTAT TGAAGAACTG TAAAATCCAA AATGCCATTT TAGATCGAGG TTGTATCATC
CCTGAAGGAA TGGTGATTGG TTATAATCAT GATCACGATC GGGCTAAGGG TTTTAGGGTA
TCCGAAAAAG GCGTTACTTT AGTAACACGG AAAATGTTGG GTTTACCTGT TGGCTACGAA
TAA
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| Protein sequence | MSNIRYISNL TRDTYALILA GGRGSRLYEL TDWRAKPALY FGGKYRIIDF PLSNCINSGI
RRVGVVTQYK SHSLIRHVTR GWGHFKKELG ESVEILPASQ QTSGNWYQGT ADAVFQNIDI
IRQEIPKYVM ILSGDHIYRM DYAGLLAAHA ESGAEMTVCC LETPIDEAAG AFGVMEVDSE
HRVIGFEEKP AEPKSIPSDP TMCLASMGNY VFNTKFLFEQ LKKDANNEKS DRDFGKDIIP
AIIENHKVFA FPFSSAVAGQ PSYWRDVGTL DSFFQANMEL LLPTPPLNLY DAKWPIWTYQ
EQLPPAKFVF DDDDRRGMAV DSIVSGGCII SGAKVKRCVL FDEVRVCSYS FVKDSVLLPD
VVVLKNCKIQ NAILDRGCII PEGMVIGYNH DHDRAKGFRV SEKGVTLVTR KMLGLPVGYE
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