| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3355 |
|---|
| Symbol | glgC |
|---|
| ID | 8138722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 3883099 |
|---|
| End bp | 3884340 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644870973 |
|---|
| Product | glucose-1-phosphate adenylyltransferase |
|---|
| Protein accession | YP_003023138 |
|---|
| Protein GI | 253701949 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 0.548111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCCA TGAGTAATGT CGGAAACACG ATTGCAATGG TGCTGGCAGG GGGCAAAGGG
GAAAGGCTCA GCCCGCTGAC GACGCGCAGG GCCAAACCGA GCGTCATGTT CGGCGGCAAG
TACAAGATCA TCGACTTCGT GCTGAGCAAC CTCTTCAACT CGGGTATCAA GAAGGTCTAC
ATCCTGACCC AGTACCGCGC CTACTCGCTC ACCAAGCACA TCCGGGAGTC CTGGGGCAAG
TGGACCGGGC TAGGAGAGTT CTTCGTCTCC ATCTCGCCTG AGACCAGCTC CGAGAGCGAG
GAGTGGTTCA AGGGGACGGC CGACGCGATC CTGCAGTATC TGAGGTTCGT CGAGTCCTCA
GACGCGGACT ACGTCGCCAT CTTCGGCGGC GACCACATCT ACAAGATGGA CGTGAGCCAG
ATGATCGACT ACCACCGCAG AACCCGCGCC GACCTTACCG TTGCCGCCCT GGAGGTCCCG
GTCGAGGATG CCAGCCGCTT CGGCGTCTTC TCGGTGGACG AGGATTACCA CATCACCGCC
TTCGCCGAGA AGCCGGCTAA GCCTGAGTGC ATCCCGGGGC GCAGCACCTG CTTCGCCTCC
ATGGGGAACT ACATCTTCTC CACCAAGAAG CTGATCGAGG TGCTGCAGGA GGGGAAGAAG
CGGTACGAGG ATCTGGACTT CGGCAAGCAC GTCATCCCGA TGATGCTGGA AAACCGGGAC
AAGGTGTACG CCTACAACTT CAACGACAAC ATCATCCCCG GGATGAAGGC GGAGGAGAAG
GGGTACTGGA AGGACGTCGG CACCCTCGAT TCCTACTACG AGGCCAACAT GGACCTCATC
AACGTCTCGC CGCAGTTGAA CCTGTACAAC TACAAGTGGC CCATCCTCAC CAACCAGGGG
AACCTCCCCC CCGCGAAGAC CGTCTTCGAC GAAGAGGGAA GGCGCGGCAT GAACATAGAC
TCCTACGTCT GCGCCGGGTG CATAACCAGC GGGGCCACGG TGAGAAGGAC CATCCTCGGC
CCGCGCTGCA AGGTCAACAG CTTCAGCCTG GTGGAGGACT CCATCCTCTT CGAGAACGTG
AACGTGGGGC GCAACGTCAC CATCAAGAAG GCGATCATCG ACAAGAACAT AGTCATCCCC
GACGGCACGA AAATCGGCCT CGACCACGAC CAGGACCGGC TCAAAGGGTA CCGGGTGACC
GAATCGGGGA TCGTCGTGGT CTCCAACCCT GAAGCGAGGT AA
|
|---|
| Protein sequence | MYAMSNVGNT IAMVLAGGKG ERLSPLTTRR AKPSVMFGGK YKIIDFVLSN LFNSGIKKVY
ILTQYRAYSL TKHIRESWGK WTGLGEFFVS ISPETSSESE EWFKGTADAI LQYLRFVESS
DADYVAIFGG DHIYKMDVSQ MIDYHRRTRA DLTVAALEVP VEDASRFGVF SVDEDYHITA
FAEKPAKPEC IPGRSTCFAS MGNYIFSTKK LIEVLQEGKK RYEDLDFGKH VIPMMLENRD
KVYAYNFNDN IIPGMKAEEK GYWKDVGTLD SYYEANMDLI NVSPQLNLYN YKWPILTNQG
NLPPAKTVFD EEGRRGMNID SYVCAGCITS GATVRRTILG PRCKVNSFSL VEDSILFENV
NVGRNVTIKK AIIDKNIVIP DGTKIGLDHD QDRLKGYRVT ESGIVVVSNP EAR
|
|---|
| |