12 homologs were found in PanDaTox collection
for query gene Swit_5009 on replicon NC_009508
Organism: Sphingomonas wittichii RW1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009508  Swit_5009  VIRB2 type IV secretion fmaily protein  100 
 
 		 113 aa  219  8e-57  Sphingomonas wittichii RW1  Bacteria  normal  0.0925105  normal  0.161179 
 
 
-
 
NC_007798  NSE_0770  type IV secretion system protein VirB2  38.71 
 
 		 115 aa  58.9  0.00000002  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  1  n/a   
 
 
-
 
NC_009717  Xaut_5088  VIRB2 type IV secretion fmaily protein  42.86 
 
 		 100 aa  59.3  0.00000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011982  Avi_8226  type IV secretion system pilin subunit VirB2  43.24 
 
 		 121 aa  57.8  0.00000005  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_6161  type IV secretion system pilin subunit VirB2  37.04 
 
 		 120 aa  53.1  0.000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.141107  normal  1 
 
 
-
 
NC_009475  BBta_p0257  Type IV secretory pathway AvhB2 protein  38.27 
 
 		 98 aa  51.2  0.000004  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
-
 
NC_007798  NSE_0768  putative type IV secretion system protein VirB2  34.91 
 
 		 121 aa  48.5  0.00003  Neorickettsia sennetsu str. Miyayama  Bacteria  normal  1  n/a   
 
 
-
 
NC_008242  Meso_4179  VIRB2 type IV secretion  37.18 
 
 		 111 aa  48.5  0.00003  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009622  Smed_6407  VIRB2 type IV secretion fmaily protein  36.36 
 
 		 112 aa  46.6  0.0001  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009469  Acry_3521  VIRB2 type IV secretion fmaily protein  37.5 
 
 		 121 aa  44.3  0.0006  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_008242  Meso_4348  VIRB2 type IV secretion  41.58 
 
 		 99 aa  41.6  0.003  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011986  Avi_9822  type IV secrection system pilin protein  42.11 
 
 		 116 aa  42  0.003  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>