8 homologs were found in PanDaTox collection
for query gene Smed_6407 on replicon NC_009622
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009622  Smed_6407  VIRB2 type IV secretion fmaily protein  100 
 
 		 112 aa  210  3.9999999999999995e-54  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011986  Avi_9822  type IV secrection system pilin protein  74.11 
 
 		 116 aa  140  7e-33  Agrobacterium vitis S4  Bacteria  n/a    n/a   
 
 
-
 
NC_008242  Meso_4179  VIRB2 type IV secretion  87.95 
 
 		 111 aa  138  1.9999999999999998e-32  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009669  Oant_4564  VIRB2 type IV secretion fmaily protein  66.67 
 
 		 115 aa  137  3e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.123188  n/a   
 
 
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NC_007960  Nham_4447  conjugal transfer protein, trbC  50 
 
 		 101 aa  72.4  0.000000000002  Nitrobacter hamburgensis X14  Bacteria  normal  0.633969  n/a   
 
 
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NC_009717  Xaut_5088  VIRB2 type IV secretion fmaily protein  37.74 
 
 		 100 aa  47.4  0.00006  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009508  Swit_5009  VIRB2 type IV secretion fmaily protein  36.36 
 
 		 113 aa  46.6  0.0001  Sphingomonas wittichii RW1  Bacteria  normal  0.0925105  normal  0.161179 
 
 
-
 
NC_009475  BBta_p0257  Type IV secretory pathway AvhB2 protein  37.36 
 
 		 98 aa  45.8  0.0002  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  1 
 
 
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