| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4179 |
|---|
| Symbol | |
|---|
| ID | 4178775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008242 |
|---|
| Strand | - |
|---|
| Start bp | 78972 |
|---|
| End bp | 79307 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638059087 |
|---|
| Product | VIRB2 type IV secretion |
|---|
| Protein accession | YP_665810 |
|---|
| Protein GI | 110346992 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCC CTTCTCACCA CTCTGCCCAG ATGTCTGCAG GCAGAATGAC CGCGCTCACG
ACAATCGTGC TCTTTTGCTC GATGCTGGCT GATCCAGCCT TTGCCCAGTC CTCTGGCGCG
TTCGCACCGC TCGAAACCGC GGTGCAGATG ATCGTGGATT TCATAACCGG TCCCTTCGGG
CGACTGCTCG CAATCATAGC GGTGATTGCG CTTGGCTTTC TCGCCTTCGC CGGACGCCTC
TCCTGGTTCA CGGCCGGCGC GGTGGTGCTC GGCATCGGCC TCGTCTTCGG CGCGCCGGCA
ATCGTCGACG AGATGATTGC GGCCGTGGGG AACTGA
|
|---|
| Protein sequence | MNSPSHHSAQ MSAGRMTALT TIVLFCSMLA DPAFAQSSGA FAPLETAVQM IVDFITGPFG
RLLAIIAVIA LGFLAFAGRL SWFTAGAVVL GIGLVFGAPA IVDEMIAAVG N
|
|---|
| |