| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0257 |
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| Symbol | avhB2 |
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| ID | 5148632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 189698 |
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| End bp | 189994 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640539134 |
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| Product | Type IV secretory pathway AvhB2 protein |
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| Protein accession | YP_001220567 |
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| Protein GI | 148241066 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTCTC CTCTTAAACA CTCCGCTGCC ATTCTTTGCG TGGGAGCCGT CCTCAGCATC
GCCTTGGTCG AGCCTGCGCT CGCGCAAACC GCGAACATCG AGGGTGTGCT GCAAAATATC
GTCAACATGT TGACTGGCAA CGTGGCGCGC CTGCTGGCCA CGCTGGCGGT CATCATCGTC
GGCATCGCCT GGATGTTCGG CTATCTCGAT CTGCGCAAGG CCGCCTATGT TGTGCTCGGT
GTCGCCATCA CGTTCGGCGC CTCCGAGGTG GTCTCGACCT TGACTGGAGG TCGTTGA
|
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| Protein sequence | MTSPLKHSAA ILCVGAVLSI ALVEPALAQT ANIEGVLQNI VNMLTGNVAR LLATLAVIIV
GIAWMFGYLD LRKAAYVVLG VAITFGASEV VSTLTGGR
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