13 homologs were found in PanDaTox collection
for query gene Sros_1315 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_1315  hypothetical protein  100 
 
 
309 aa  632  1e-180  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.438645 
 
 
-
 
NC_009921  Franean1_2797  hypothetical protein  33.33 
 
 
339 aa  70.1  0.00000000004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2597  putative atp/GTP-binding protein  29.45 
 
 
336 aa  54.3  0.000003  Frankia sp. EAN1pec  Bacteria  normal  0.767942  normal 
 
 
-
 
NC_013757  Gobs_0668  putative ATP/GTP-binding protein  30.69 
 
 
303 aa  51.6  0.00002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8601  putative ATP/GTP-binding protein  28.3 
 
 
276 aa  50.1  0.00005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.193536  normal  0.420749 
 
 
-
 
NC_013131  Caci_6897  hypothetical protein  27.88 
 
 
296 aa  48.5  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0115035  normal  0.305305 
 
 
-
 
NC_007777  Francci3_1784  hypothetical protein  30.94 
 
 
354 aa  47.4  0.0003  Frankia sp. CcI3  Bacteria  normal  decreased coverage  0.00707471 
 
 
-
 
NC_008699  Noca_2232  putative atp/GTP-binding protein  33.1 
 
 
299 aa  46.2  0.0007  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1644  hypothetical protein  28.93 
 
 
354 aa  45.8  0.001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0163847  decreased coverage  0.000136563 
 
 
-
 
NC_014210  Ndas_1220  hypothetical protein  27.65 
 
 
288 aa  44.7  0.002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.909283  decreased coverage  0.00438617 
 
 
-
 
NC_013530  Xcel_0845  hypothetical protein  30.67 
 
 
318 aa  43.9  0.004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.289491  n/a   
 
 
-
 
NC_013131  Caci_4028  hypothetical protein  28.57 
 
 
285 aa  43.1  0.005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.335783  hitchhiker  0.00331884 
 
 
-
 
NC_007777  Francci3_1739  putative ATP/GTP-binding protein  30.08 
 
 
341 aa  42.4  0.009  Frankia sp. CcI3  Bacteria  normal  0.0339403  normal  0.147783 
 
 
-
 
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