| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1739 |
|---|
| Symbol | |
|---|
| ID | 3906805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2073781 |
|---|
| End bp | 2074806 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637879077 |
|---|
| Product | putative ATP/GTP-binding protein |
|---|
| Protein accession | YP_480844 |
|---|
| Protein GI | 86740444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0339403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.147783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGC GCCGGCTCAC CTTCCTCGCT GTACTCGCGC TGGCGATGAT CGGATGCCTC
GCTGTTCCGG CAGCCGCCAT AGACCCACTT GGCGGCACGG GGTGCAGCCA GAATCCCTCT
CCAGGATGCG AGCTTTGGGC AGGAATCCCA GGGGGGCCAT CGCCAGCTCC CGAAGCAGAA
CCGCCGTCCG CAGGCTCCGA GGCCAACGGA GGTAGCGGTT CAGGACGGAC CGCGCCACCC
GGTGACAGGG CTTTGGACCC GCCCGCATTG CCGATAGCGG ATTGCGCGTA TGTCCGCAGC
GACTATCAGC CGCCCGCGGG CGGCGTGCGG CCCGCCTCCT ATCAGCCGCC GTCAGCGGGT
GGGCTGGTGG TGCGGCCGGC GGTGCTCGGT TCATCGGGGT TGTCGGTGCG TCCGGTGGCG
TCTCAGCCAG GGCAGGGGCC GGGTGCTTGG TACATCTACC GGTGCGCGTC GGGCGGTGAG
CGGGACGCGT TGTATCGGGC GCCGGTGTGG ATTCCGGACG CGGCGCCGGG CACGGGGCCT
GCCCCGGACC CGGAGGCGTT GGCGGAGCAG GCGCGTAACC AGCTGCGGCT GGCTGGCCCG
GCGATCGGGA TGAGCCCGGT TGCCGATCAG ATGGTGCGGC TACCGACATG GCTGTGGCTG
GACCCCGCTG GGTGGCAGCA GGTGGCGGCG ACGGCAGCGG CGGGTGGGGT GTCGGTGACC
GCGGTTGCCA AGCCCGTGGC GGTGGTCTGG TCGCTGGGGG ATGGCGGGAC GGTGACCTGC
ACGGGTCCAG GTACGCCGTT TCCGGCCGGG GCCGATCCGA AGAGCGCTTC GCCGGACTGC
GGCTACACCT ATACCCGCCG GTCGCTGGAC GAGGCGGGTG GGACGTTTGC GGTGACGGCG
GCGGTGCGCT GGGACGTGAC CTGGGCCGGC GCCGGCCAGA CAGGGGTGTT CCCGGGGCTG
ACGACCGTGT CGACAACGGC GGCCCGGGTG ATCGATGTTC CCGCGCTGAC GACGGGCGGT
GGCTGA
|
|---|
| Protein sequence | MLKRRLTFLA VLALAMIGCL AVPAAAIDPL GGTGCSQNPS PGCELWAGIP GGPSPAPEAE
PPSAGSEANG GSGSGRTAPP GDRALDPPAL PIADCAYVRS DYQPPAGGVR PASYQPPSAG
GLVVRPAVLG SSGLSVRPVA SQPGQGPGAW YIYRCASGGE RDALYRAPVW IPDAAPGTGP
APDPEALAEQ ARNQLRLAGP AIGMSPVADQ MVRLPTWLWL DPAGWQQVAA TAAAGGVSVT
AVAKPVAVVW SLGDGGTVTC TGPGTPFPAG ADPKSASPDC GYTYTRRSLD EAGGTFAVTA
AVRWDVTWAG AGQTGVFPGL TTVSTTAARV IDVPALTTGG G
|
|---|
| |