Gene Ndas_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1220 
Symbol 
ID9245070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp1521597 
End bp1522463 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003679165 
Protein GI297560191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.909283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00438617 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGAGAC TCGTACGACC CACGGCCACG GCCGCGGTAC TGACCCTGCT GGCGGCCGGA 
GCCGCCACCG CCCCCGCGCA CGCCGACGAC GGCTCCTTCC TCGGCCAGAT CGAGTGCGGC
AGCTCGGGCG GGAACGGCTG CTCCATCCTG CTGCGCTGGT GGCAGAGCCA GGCGGGCCAG
CAGGGCTCCG GCGGTTCGGG CGGCTCGGGG GGCTCCGGCG GCTCCGGAGC CCAGGACGAC
CCCTACGCCC ACGTCGACTG GGACGCGATC GACTGGTCCC AGGTGGACTG GAGCGCCATC
GACTGGGAGT CCATCGACTA CGAGCAGGAC GGGGAGGAGG GGCAGGAGGG CACCGACATG
GTCACCGCCC TCCAGGAGGC CATGGCCTCC TTCGAACTGC CCCCGCCCCG GATCGAGACC
TCCCCGGGCA GCGACTCCCT GGTCCTGGTC AACACCCCCG TGTGGCTGTG GGTGGAGTCC
CAGGACTGGG AGGCCACCGA GGCCTCCGCC GAGCTCCAGG ACTCCTCCTT CACGGTCAGC
GCCAGCCCCG TCTCCACCGT CTGGACGCTG GGCGACGGCA CGCAGATCAG CTGCGAGGGC
CCCGGGACGC CCTTCGACCC GGCCGTGCAC GACCCCGAGT CGGCCTCCCC CGACTGCGGG
CACGTCTACA CCCTGCCCTC CGACGGCCAG CCCGGCGGCG CCTACCCCGT CACCGTCCAG
GTCGGATGGA ACGTGGGCTG GGAGATCACC GAGGGCGAGT TCGCCGAGGG CGCGACGGGC
GAGTTCGACC CGCTCACCAC GACCTCGCAG GTCGAACTCC AGGTGGCCGA ATCCCAGGGC
CTGGTCACCG GCACCGGCAA CCGCTAA
 
Protein sequence
MLRLVRPTAT AAVLTLLAAG AATAPAHADD GSFLGQIECG SSGGNGCSIL LRWWQSQAGQ 
QGSGGSGGSG GSGGSGAQDD PYAHVDWDAI DWSQVDWSAI DWESIDYEQD GEEGQEGTDM
VTALQEAMAS FELPPPRIET SPGSDSLVLV NTPVWLWVES QDWEATEASA ELQDSSFTVS
ASPVSTVWTL GDGTQISCEG PGTPFDPAVH DPESASPDCG HVYTLPSDGQ PGGAYPVTVQ
VGWNVGWEIT EGEFAEGATG EFDPLTTTSQ VELQVAESQG LVTGTGNR