12 homologs were found in PanDaTox collection
for query gene Slin_2000 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013730  Slin_2000  transcriptional regulator, XRE family  100 
 
 		 172 aa  344  4e-94  Spirosoma linguale DSM 74  Bacteria  normal  0.0221845  normal  0.0174443 
 
 
-
 
NC_013037  Dfer_1044  transcriptional regulator, XRE family  40.83 
 
 		 125 aa  122  2e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.329411  normal  0.26776 
 
 
-
 
NC_009441  Fjoh_2803  bacteriophage CI repressor  32 
 
 		 155 aa  82.4  0.000000000000003  Flavobacterium johnsoniae UW101  Bacteria  normal  0.665704  n/a   
 
 
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NC_013162  Coch_1905  HTH_3 family transcriptional regulator protein  27.65 
 
 		 148 aa  72  0.000000000004  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_002950  PG1063  transcriptional regulator, putative  29.07 
 
 		 146 aa  68.6  0.00000000004  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.150252 
 
 
-
 
NC_008255  CHU_1708  transcriptional regulator  25.83 
 
 		 231 aa  67.4  0.00000000009  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0192115  normal  0.600335 
 
 
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NC_014230  CA2559_10438  transcriptional regulator, putative  26.22 
 
 		 147 aa  61.6  0.000000006  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
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NC_013730  Slin_4185  hypothetical protein  29.85 
 
 		 122 aa  46.2  0.0002  Spirosoma linguale DSM 74  Bacteria  normal  0.373535  normal  1 
 
 
-
 
NC_008255  CHU_0270  hypothetical protein  30.77 
 
 		 123 aa  43.9  0.001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013730  Slin_5589  putative phage repressor  30.16 
 
 		 237 aa  43.5  0.002  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A2593  transcriptional regulator  35.19 
 
 		 116 aa  42.4  0.003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
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NC_013162  Coch_0868  putative phage repressor  29.49 
 
 		 244 aa  40.8  0.01  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.0000901562  n/a   
 
 
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