10 homologs were found in PanDaTox collection
for query gene Coch_1905 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013162  Coch_1905  HTH_3 family transcriptional regulator protein  100 
 
 		 148 aa  303  5.0000000000000004e-82  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
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NC_009441  Fjoh_2803  bacteriophage CI repressor  39.51 
 
 		 155 aa  119  1.9999999999999998e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  0.665704  n/a   
 
 
-
 
NC_014230  CA2559_10438  transcriptional regulator, putative  38.99 
 
 		 147 aa  112  2.0000000000000002e-24  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_002950  PG1063  transcriptional regulator, putative  31.79 
 
 		 146 aa  75.5  0.0000000000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.150252 
 
 
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NC_013730  Slin_2000  transcriptional regulator, XRE family  27.65 
 
 		 172 aa  72  0.000000000003  Spirosoma linguale DSM 74  Bacteria  normal  0.0221845  normal  0.0174443 
 
 
-
 
NC_008255  CHU_1708  transcriptional regulator  46.77 
 
 		 231 aa  70.9  0.000000000006  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0192115  normal  0.600335 
 
 
-
 
NC_013037  Dfer_1044  transcriptional regulator, XRE family  30.28 
 
 		 125 aa  70.5  0.000000000008  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.329411  normal  0.26776 
 
 
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NC_013730  Slin_4185  hypothetical protein  34.38 
 
 		 122 aa  45.1  0.0004  Spirosoma linguale DSM 74  Bacteria  normal  0.373535  normal  1 
 
 
-
 
NC_013162  Coch_0868  putative phage repressor  35.21 
 
 		 244 aa  41.2  0.005  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.0000901562  n/a   
 
 
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NC_002939  GSU3324  Cro/CI family transcriptional regulator  30.43 
 
 		 212 aa  40.4  0.009  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
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