Gene Slin_5589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5589 
Symbol 
ID8729363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6804630 
End bp6805343 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID 
Productputative phage repressor 
Protein accessionYP_003390353 
Protein GI284040423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA ATTGTTTAAA AAAAATAGCA TCCCCCGTGA CAATCCAGGA CAGACTGAAG 
CAAGTTTTTG ATGCCCTTGG CATAACTATC TATCAGATAG CGAAGGAGTT AGGTGAAAAC
CCATCGAAGT TTTACAATAT CTTGAATGGT AGGGCAAAGC CCTCATATGA CACAATTATG
AGTCTGCTGG CCTGCTATCC GCAAATCAGT GCCGACTACC TGATTCGGGG TATACTGCCA
ATCTTAAATT CACCACAAGC AAACGCCCGG CTTCTTTCTG CCGATGACGA CACCATTGAG
GTTCCGTTCA TACCGGTAAA GTTTTACGCC ACCTTCGTGG AGAGTTTCGC CGAGGGCATT
CATGCAACCG ATGTAGACTC CTTTCGGGTG CGGAAGCCTA TTGTAAAGGG GCATAAGAAC
TCGGTTGTGC TGGAGATTTC GGGGAACAGC ATGAGTCCGC AGCTGGCGCA TGGTGCTAAA
GTGCTGGCGA TTCCCGTCAG CGAAAACAAC TGGGAGTACC AGTCGGGGGG TGTTTATGCG
GTCATGTACC GGGATTATTT TGTGGTGAAG CGTATCCGCG ACAACGAGCT GCTAACCAAA
AAATACCTGA CCCTCCACTC CGACAACCCC AACGGCGGCA ACGTAACGGT GCCCTTGCAG
GACATTCGGG GCCTTTGGAA GATCGTAGCG ATTGTAGAAG CGCCGGTGGA GTAA
 
Protein sequence
MAENCLKKIA SPVTIQDRLK QVFDALGITI YQIAKELGEN PSKFYNILNG RAKPSYDTIM 
SLLACYPQIS ADYLIRGILP ILNSPQANAR LLSADDDTIE VPFIPVKFYA TFVESFAEGI
HATDVDSFRV RKPIVKGHKN SVVLEISGNS MSPQLAHGAK VLAIPVSENN WEYQSGGVYA
VMYRDYFVVK RIRDNELLTK KYLTLHSDNP NGGNVTVPLQ DIRGLWKIVA IVEAPVE