Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1708 |
Symbol | |
ID | 4185484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 2010222 |
End bp | 2010917 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638071707 |
Product | transcriptional regulator |
Protein accession | YP_678317 |
Protein GI | 110638108 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0192115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.600335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAGAAT CAATTGTAGA GCGAGTCCTT GTACTGATAA AGGATTATGG GCTCACAGCC TCCGAATTTG CTGATAAAAT CGATGTACAG CGCTCCAGTA TGTCGCATTT AGTCTCAGGA AGAAATAAAC CCAGTCTGGA TTTCATTCAG AAGATATTAA ACAATTTTTC AGACATCAAC CCTACTTGGC TTATTATGGG AACAGGACCG ATGAAGCAAT TAGATTTATT CGATATTAAA GGAGATGTAG CGCCTACAGA GCCCATACCT GCAGAAAAAT TTAAATCAGA GACAGCCGTA CAACCGGTTA CAGAATTAAT TACTGCGGAA CAAGAATCAG CTTTTAGTGA GCCCGCTAAA GTTGTTTATG CACAAACTGC TCCTGCACCG GTAGCATTGC CGGAACCACC TGTACAGCAT GTTGCGCTTG AGCGAGAAGA AGTTTTGATA CAACCTCAAA TAACCGCTTC TGTACCTCTG ATCCCTCCGG TAACCATTCC TGAATCACCA GTGATTCAGC CAGCTGCTGC TGCACCGGTT ACGCCTCAAA TCCCACCTCC GGCAGCTGCA CCAACACCCG TTATTCCCGC TGAAACTGCT TTTTTTACAG AAAAATCTAC TCAAAATGAT AAAAAAGTCG TAAAAATTGT CTTCTTTTAT TCTGATAATA CTTTTGAGAC ATTTAATCCA CAATAA
|
Protein sequence | MEESIVERVL VLIKDYGLTA SEFADKIDVQ RSSMSHLVSG RNKPSLDFIQ KILNNFSDIN PTWLIMGTGP MKQLDLFDIK GDVAPTEPIP AEKFKSETAV QPVTELITAE QESAFSEPAK VVYAQTAPAP VALPEPPVQH VALEREEVLI QPQITASVPL IPPVTIPESP VIQPAAAAPV TPQIPPPAAA PTPVIPAETA FFTEKSTQND KKVVKIVFFY SDNTFETFNP Q
|
| |