Gene CHU_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1708 
Symbol 
ID4185484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp2010222 
End bp2010917 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content42% 
IMG OID638071707 
Producttranscriptional regulator 
Protein accessionYP_678317 
Protein GI110638108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0192115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.600335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT CAATTGTAGA GCGAGTCCTT GTACTGATAA AGGATTATGG GCTCACAGCC 
TCCGAATTTG CTGATAAAAT CGATGTACAG CGCTCCAGTA TGTCGCATTT AGTCTCAGGA
AGAAATAAAC CCAGTCTGGA TTTCATTCAG AAGATATTAA ACAATTTTTC AGACATCAAC
CCTACTTGGC TTATTATGGG AACAGGACCG ATGAAGCAAT TAGATTTATT CGATATTAAA
GGAGATGTAG CGCCTACAGA GCCCATACCT GCAGAAAAAT TTAAATCAGA GACAGCCGTA
CAACCGGTTA CAGAATTAAT TACTGCGGAA CAAGAATCAG CTTTTAGTGA GCCCGCTAAA
GTTGTTTATG CACAAACTGC TCCTGCACCG GTAGCATTGC CGGAACCACC TGTACAGCAT
GTTGCGCTTG AGCGAGAAGA AGTTTTGATA CAACCTCAAA TAACCGCTTC TGTACCTCTG
ATCCCTCCGG TAACCATTCC TGAATCACCA GTGATTCAGC CAGCTGCTGC TGCACCGGTT
ACGCCTCAAA TCCCACCTCC GGCAGCTGCA CCAACACCCG TTATTCCCGC TGAAACTGCT
TTTTTTACAG AAAAATCTAC TCAAAATGAT AAAAAAGTCG TAAAAATTGT CTTCTTTTAT
TCTGATAATA CTTTTGAGAC ATTTAATCCA CAATAA
 
Protein sequence
MEESIVERVL VLIKDYGLTA SEFADKIDVQ RSSMSHLVSG RNKPSLDFIQ KILNNFSDIN 
PTWLIMGTGP MKQLDLFDIK GDVAPTEPIP AEKFKSETAV QPVTELITAE QESAFSEPAK
VVYAQTAPAP VALPEPPVQH VALEREEVLI QPQITASVPL IPPVTIPESP VIQPAAAAPV
TPQIPPPAAA PTPVIPAETA FFTEKSTQND KKVVKIVFFY SDNTFETFNP Q