11 homologs were found in PanDaTox collection
for query gene Sked_31770 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_31770  hypothetical protein  100 
 
 		 198 aa  384  1e-106  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.590627  normal  1 
 
 
-
 
NC_014151  Cfla_0669  transcriptional regulator, TetR family  33.16 
 
 		 240 aa  95.5  5e-19  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.922821  hitchhiker  0.000725922 
 
 
-
 
NC_013530  Xcel_2956  transcriptional regulator, TetR family  32.49 
 
 		 207 aa  88.6  5e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1897  transcriptional regulator, TetR family  30.68 
 
 		 200 aa  66.2  0.0000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0417503  decreased coverage  0.000000883258 
 
 
-
 
NC_013131  Caci_3213  transcriptional regulator, TetR family  25.82 
 
 		 195 aa  63.2  0.000000002  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000469892  normal  0.140374 
 
 
-
 
NC_013521  Sked_12460  hypothetical protein  30.05 
 
 		 211 aa  57  0.0000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2098  TetR family transcriptional regulator  28.72 
 
 		 199 aa  54.3  0.000001  Nocardioides sp. JS614  Bacteria  normal  0.0785695  n/a   
 
 
-
 
NC_013947  Snas_2881  transcriptional regulator, TetR family  25.91 
 
 		 367 aa  49.7  0.00003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_0070  transcriptional regulator, TetR family  27.92 
 
 		 202 aa  45.1  0.0007  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  decreased coverage  0.00707412 
 
 
-
 
NC_013441  Gbro_1283  regulatory protein TetR  23.27 
 
 		 205 aa  43.5  0.002  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_2894  transcriptional regulator, TetR family  26.63 
 
 		 218 aa  42.7  0.004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
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