22 homologs were found in PanDaTox collection
for query gene SbBS512_A0178 on replicon NC_010660
Organism: Shigella boydii CDC 3083-94



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010660  SbBS512_A0178  transcriptional regulator MxiE  100 
 
 		 210 aa  432  1e-120  Shigella boydii CDC 3083-94  Bacteria  normal  0.0571394  n/a   
 
 
-
 
NC_011205  SeD_A3209  invasion protein  37.36 
 
 		 249 aa  108  4.0000000000000004e-23  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.902486  normal  1 
 
 
-
 
NC_011149  SeAg_B3021  invasion protein  37.36 
 
 		 249 aa  109  4.0000000000000004e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A3052  invasion protein  37.36 
 
 		 249 aa  109  4.0000000000000004e-23  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.227762 
 
 
-
 
NC_011083  SeHA_C3089  invasion protein  37.36 
 
 		 249 aa  108  4.0000000000000004e-23  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.80206 
 
 
-
 
NC_011080  SNSL254_A3104  invasion protein  37.36 
 
 		 249 aa  108  4.0000000000000004e-23  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  hitchhiker  0.0000120777 
 
 
-
 
NC_007435  BURPS1710b_A0587  type III secretion system transcriptional regulator BsaN  40.16 
 
 		 208 aa  100  2e-20  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.0000113991  n/a   
 
 
-
 
NC_007650  BTH_II0827  type III secretion system transcriptional regulator BsaN  40.16 
 
 		 252 aa  100  2e-20  Burkholderia thailandensis E264  Bacteria  normal  0.0781437  n/a   
 
 
-
 
NC_009075  BURPS668_A2176  AraC family transcriptional regulator  40.16 
 
 		 221 aa  100  2e-20  Burkholderia pseudomallei 668  Bacteria  normal  0.187611  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2088  AraC family transcriptional regulator  40.16 
 
 		 221 aa  100  2e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  0.203481  n/a   
 
 
-
 
NC_008835  BMA10229_2059  type III secretion system transcriptional regulator BsaN  40.16 
 
 		 252 aa  99  4e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1545  type III secretion system transcriptional regulator BsaN  40.16 
 
 		 252 aa  99  4e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A0739  type III secretion system transcriptional regulator BsaN  40.16 
 
 		 221 aa  99  5e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  0.480247  n/a   
 
 
-
 
NC_011353  ECH74115_4150  EivF  37.82 
 
 		 249 aa  95.9  4e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.0288495 
 
 
-
 
NC_009632  SaurJH1_0092  helix-turn-helix domain-containing protein  29.73 
 
 		 745 aa  43.9  0.002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009487  SaurJH9_0089  helix-turn-helix domain-containing protein  29.73 
 
 		 745 aa  43.9  0.002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_012792  Vapar_5627  transcriptional regulator, AraC family  29.81 
 
 		 256 aa  42.7  0.004  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_3104  response regulator receiver protein  25 
 
 		 266 aa  42.7  0.004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2057  AraC family transcriptional regulator  21.95 
 
 		 293 aa  42.4  0.005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.227096  n/a   
 
 
-
 
NC_009632  SaurJH1_2452  helix-turn-helix domain-containing protein  26.53 
 
 		 701 aa  41.6  0.009  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0494728  n/a   
 
 
-
 
NC_009487  SaurJH9_2405  helix-turn-helix domain-containing protein  26.53 
 
 		 701 aa  41.6  0.009  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.269245  n/a   
 
 
-
 
NC_013517  Sterm_0047  transcriptional regulator, AraC family  24.72 
 
 		 254 aa  41.2  0.01  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.230347  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>