Gene SbBS512_A0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0178 
SymbolmxiE 
ID6273328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand+ 
Start bp118605 
End bp119237 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content33% 
IMG OID641728816 
Producttranscriptional regulator MxiE 
Protein accessionYP_001883207 
Protein GI187734468 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones113 
Plasmid unclonability p-value0.0571394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGGT TTTTTTTTGT CCGAAATCAA AATATAAAAT TCAGTGATAA TGTGAACTAT 
CATTATCGCT TTAACATTAA TAGTTGTGCA AAATTTCTTG CTTTTTGGGA CTATTTCAGT 
GGTGCTCTAG TAGAGCATAG CCATGCTGAA AAATGTATTC ATTTCTATCA TGAGAATGAT 
CTTCGGGATA GTTGTAATAC CGAATCGATG CTTGATAAGT TAATGTTAAG ATTCATCTTT 
TCATCTGACC AGAATGTAAG TAATGCACTG GCTATGATAC GAATGACTGA GTCATATCAT 
TTGGTTCTTT ATCTTCTGAG AACTATTGAG AAAGAAAAGG AGGTAAGAAT AAAGAGTCTG 
ACAGAGCATT ATGGTGTGTC GGAGGCTTAT TTTAGATCTT TATGTAGAAA AGCTTTAGGG 
GCAAAAGTCA AAGAACAACT GAACACTTGG CGGTTAGTAA ATGGTTTATT AGATGTATTT 
TTGCACAATC AAACAATCAC TTCTGCTGCC ATGAATAATG GGTATGCATC AACATCCCAT 
TTTTCAAATG AGATAAAAAC ACGACTAGGC TTTTCTGCAA GAGAATTATC GAATATTACT 
TTTTTAGTGA AAAAAATAAA TGAAAAAATT TAA
 
Protein sequence
MEGFFFVRNQ NIKFSDNVNY HYRFNINSCA KFLAFWDYFS GALVEHSHAE KCIHFYHEND 
LRDSCNTESM LDKLMLRFIF SSDQNVSNAL AMIRMTESYH LVLYLLRTIE KEKEVRIKSL 
TEHYGVSEAY FRSLCRKALG AKVKEQLNTW RLVNGLLDVF LHNQTITSAA MNNGYASTSH 
FSNEIKTRLG FSARELSNIT FLVKKINEKI