Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_A0587 |
Symbol | bsaN |
ID | 3692309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007435 |
Strand | - |
Start bp | 780303 |
End bp | 780929 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637730841 |
Product | type III secretion system transcriptional regulator BsaN |
Protein accession | YP_335746 |
Protein GI | 76819330 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000113991 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCATG CCGTTTCGAT CGACAAGAAT AAATCGGCGC TGGTTATCGG CATCGGTCAA TTCAAAATCG CGTCGCGTGA AGGCGCATGG CGTTTTCATG ACGTGCCGTT ATTCGAGGCG GCGAAATTGC TCGCTTTTCT GGAAAGCTGC GGCGCGCCGG ACGGCGCCGG CCGCGAATAT CGCGCGGGGG CGCCGGACGG CGCGGTGATC GACGCGCCCG GCGATCTGAG CATCTGGAAA TTCGACCGCT GGCTGATCGC CCGCGTGATG GGCGCGCCGC ACGGCGCCGA TCCGCTGTTC GCGTTCCTGC GCGCGCAGGA GAGCTACGGG CTCGTGCGCT TCTTGCTGCG CGAGCGTGCG AACCCGCAGC CGATCGCCGC GCTTGCCGCG CGCTACGGCG TGTCGGAGCC GCACTTTCGC CGGCTGTGCC GGCAGGCGCT CGGCCGCGGC CTGAAGCGCG AGCTTCGGCA ATGGCGCGCC GCGCAGGCGG TGCTCGAGGT GGTCGAGAGC CGCGACAGCA TGACCGAGGT CGCGATGAGC AACGGCTTCG CGTCTTCGTC CCACTTCTCG CGGGAAATCA AGGACTTGTT CGGCATTTCG CCGTGCCGGT TCCGTCGCCG GACATGA
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Protein sequence | MSHAVSIDKN KSALVIGIGQ FKIASREGAW RFHDVPLFEA AKLLAFLESC GAPDGAGREY RAGAPDGAVI DAPGDLSIWK FDRWLIARVM GAPHGADPLF AFLRAQESYG LVRFLLRERA NPQPIAALAA RYGVSEPHFR RLCRQALGRG LKRELRQWRA AQAVLEVVES RDSMTEVAMS NGFASSSHFS REIKDLFGIS PCRFRRRT
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