Gene SeD_A3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3209 
Symbol 
ID6872935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3087679 
End bp3088428 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content46% 
IMG OID642786227 
Productinvasion protein 
Protein accessionYP_002216868 
Protein GI198246224 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.902486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATA CGCAGGAAGT ACTTAAAGAA GGAGAGAAGC GGAAAATCCG CAGCCCGGAA 
GCATGGTTTA TACAGACGTG TTCCGCGCAA AAGCTGCATA TGTCATTTTC TGAAAGCCGA 
CACAATGAAA ATTGCCTGAT TCAGGAAGGC GCGCTGCTTT TTTGCGAGCA GGCCGTTGTC 
GCACCAGTAT CAGGAGACTT GGTTTTTCGA CCGTTAAAAA TTGAAGTACT CAGCAAATTA 
CTGGCATTTA TCGATGGCGC AGGATTAGTG GACACGACAT ATGCTGAATC CGATAAATGG 
GTTTTGCTGA GTCCTGAGTT TCGCGCTATT TGGCAAGATC GTAAACGCTG CGAGTACTGG 
TTTTTGCAGC AAATTATTAC GCCTTCTCCG GCCTTCAATA AGGTACTGGC GCTGTTACGA 
AAAAGCGAGA GTTACTGGTT GGTTGGCTAT TTACTCGCTC AGTCAACCAG CGGCAACACG 
ATGAGAATGC TGGGAGAAGA CTATGGCGTT TCTTATACCC ATTTTCGTCG TTTGTGCAGC 
AGAGCGTTGG GCGGAAAAGC GAAGAGTGAA TTACGAAACT GGCGTATGGC GCAATCGCTG 
CTGAATAGTG TAGAAGGCCA CGAGAACATC ACCCAATTAG CCGTTAATCA TGGTTACTCA 
TCGCCTTCAC ATTTTTCTAG TGAGATCAAA GAGCTGATCG GCGTTTCGCC GCGGAAATTA 
TCAAATATTA TTCAATTGGC AGACAAATGA
 
Protein sequence
MLNTQEVLKE GEKRKIRSPE AWFIQTCSAQ KLHMSFSESR HNENCLIQEG ALLFCEQAVV 
APVSGDLVFR PLKIEVLSKL LAFIDGAGLV DTTYAESDKW VLLSPEFRAI WQDRKRCEYW 
FLQQIITPSP AFNKVLALLR KSESYWLVGY LLAQSTSGNT MRMLGEDYGV SYTHFRRLCS 
RALGGKAKSE LRNWRMAQSL LNSVEGHENI TQLAVNHGYS SPSHFSSEIK ELIGVSPRKL 
SNIIQLADK