Gene BTH_II0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0827 
Symbol 
ID3845574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp967469 
End bp968227 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID637838130 
Producttype III secretion system transcriptional regulator BsaN 
Protein accessionYP_439024 
Protein GI83716503 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0781437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATC GATTCAATAA GTTCGATTGC GTGGTGGTTT CACCCGGAAA ATCCAGATCG 
TTTGCAGGTC CGGCAATCAG GCTGATCAGG CCGGTGACGG AAATCGCGAA ACTGGATGTG
TCGTTCGGCG CGGCGTCTCA TGCCGTTTCG ATCGACAAGA ATAAATCGGC GCTGGTTGTC
GGCGCCGGTC AATTCAAAAT CGCGTCGCGT GAAGGCGCAT GGCGTTTTCA TGACGTGCCG
TTATTCGAGG CGGCGAAATT GCTCGCTTTT CTGGAAAGCT GCGCGACGCC GGACGGCGCC
GGCCGCGAAT ATCGCGCGGG GGCGCCGGAC GGCGCGGTGA TCGACGCGCC CGGCGATCTG
AGCATCTGGA AATTCGACCG GTGGTTGATC GCCCGCGTGA TGGGCGCGCC GCACGGCGCC
GATCCGCTGT TCGCGTTCCT GCGCGCGCAG GAGAGCTACG GGCTCGTGCG CTTCCTGCTG
CGCGAGCGTG CGAACCCGCA GCCGATCGCC GCGCTTGCCG CGCGCTACGG CGTGTCGGAG
CCGCACTTTC GCCGGCTGTG CCGGCAGGCG CTCGGCCGCG GCCTGAAGCG CGAGCTTCGG
CAATGGCGCG CCGCGCAGGC GGTGCTCGAG GTCGTCGAGA GCCGCGACAG CATGACCGAA
GTCGCGATGA GCAACGGCTT CGCGTCGTCG TCCCACTTCT CGCGGGAAAT CAAGGACTTG
TTCGGCATTT CGCCGTGCCG GTTCCGTCGC CGGACATGA
 
Protein sequence
MANRFNKFDC VVVSPGKSRS FAGPAIRLIR PVTEIAKLDV SFGAASHAVS IDKNKSALVV 
GAGQFKIASR EGAWRFHDVP LFEAAKLLAF LESCATPDGA GREYRAGAPD GAVIDAPGDL
SIWKFDRWLI ARVMGAPHGA DPLFAFLRAQ ESYGLVRFLL RERANPQPIA ALAARYGVSE
PHFRRLCRQA LGRGLKRELR QWRAAQAVLE VVESRDSMTE VAMSNGFASS SHFSREIKDL
FGISPCRFRR RT