20 homologs were found in PanDaTox collection
for query gene Sama_2655 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008700  Sama_2655  hypothetical protein  100 
 
 
298 aa  609  1e-173  Shewanella amazonensis SB2B  Bacteria  unclonable  0.00000000824644  normal 
 
 
-
 
NC_009665  Shew185_3459  hypothetical protein  72.15 
 
 
302 aa  461  1e-129  Shewanella baltica OS185  Bacteria  unclonable  0.0000000000354114  n/a   
 
 
-
 
NC_009052  Sbal_0904  hypothetical protein  72.48 
 
 
302 aa  463  1e-129  Shewanella baltica OS155  Bacteria  unclonable  0.0000000046277  n/a   
 
 
-
 
NC_008321  Shewmr4_0920  hypothetical protein  72.15 
 
 
302 aa  459  9.999999999999999e-129  Shewanella sp. MR-4  Bacteria  unclonable  0.00000000510544  normal 
 
 
-
 
NC_008322  Shewmr7_0955  hypothetical protein  72.15 
 
 
302 aa  459  9.999999999999999e-129  Shewanella sp. MR-7  Bacteria  unclonable  0.0000014544  normal  0.349997 
 
 
-
 
NC_008577  Shewana3_0919  hypothetical protein  72.15 
 
 
302 aa  459  9.999999999999999e-129  Shewanella sp. ANA-3  Bacteria  unclonable  0.0000000244259  normal 
 
 
-
 
NC_007404  Tbd_0710  hypothetical protein  50.79 
 
 
315 aa  302  4.0000000000000003e-81  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.03339 
 
 
-
 
NC_007520  Tcr_0418  hypothetical protein  53.67 
 
 
260 aa  284  1.0000000000000001e-75  Thiomicrospira crunogena XCL-2  Bacteria  decreased coverage  0.000000000000826848  n/a   
 
 
-
 
NC_013422  Hneap_1798  hypothetical protein  35.5 
 
 
307 aa  155  6e-37  Halothiobacillus neapolitanus c2  Bacteria  unclonable  0.00000750515  n/a   
 
 
-
 
NC_009379  Pnuc_0361  hypothetical protein  27.11 
 
 
304 aa  85.9  7e-16  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0362  conserved hypothetical secreted protein  27.68 
 
 
278 aa  84.3  0.000000000000002  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.807375  normal  0.507937 
 
 
-
 
NC_003295  RSc0609  putative lipoprotein  26.37 
 
 
305 aa  79  0.00000000000009  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.581249 
 
 
-
 
NC_010682  Rpic_1848  conserved hypothetical secreted protein  26.12 
 
 
302 aa  79  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  0.51214  hitchhiker  0.00000000124644 
 
 
-
 
NC_012849  Rpic12D_5379  hypothetical protein  26.12 
 
 
302 aa  79  0.0000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal  0.183725 
 
 
-
 
NC_010581  Bind_3435  hypothetical protein  26.24 
 
 
321 aa  72.8  0.000000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.425135  normal  0.326123 
 
 
-
 
NC_011894  Mnod_0128  hypothetical protein  24.34 
 
 
300 aa  57.4  0.0000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.496561  n/a   
 
 
-
 
NC_011004  Rpal_3095  conserved hypothetical protein; putative signal peptide  23.91 
 
 
310 aa  55.8  0.0000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0691949  n/a   
 
 
-
 
NC_010505  Mrad2831_4787  hypothetical protein  20.95 
 
 
307 aa  55.5  0.000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0961  hypothetical protein  23.44 
 
 
333 aa  50.8  0.00003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0854  hypothetical protein  23.24 
 
 
333 aa  45.4  0.001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
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