Gene RPD_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0961 
Symbol 
ID4021436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1088152 
End bp1089153 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID637961152 
Producthypothetical protein 
Protein accessionYP_568100 
Protein GI91975441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTGC AGCTGGGCGT GGCGCGCGTT CGCCACGCAG GATTTCGTTT CGGGATCGCG 
ATCGGCGCAT TGGCGCTTGG CTCGGTTCTA TCTAGCAGCG CGCACGCTGG CGACGCGCCG
TCATGGCTGT CCACGGCCTC GACCTCGTCG AACAGCGCTG CCGTGCGGGC CATCAAGCCG
CGAGCCGAGC TGCTCGACGC GAAGGCTCAG AGCGACGGCG TGGATACCGA GCACATCTTC
GGCTTCAGCA TGGGCTCCGA CATCGGCAAG AAAGGCGAGA TCGAACTCGA GATCGAGAAT
GTCGGCCGCT TCAGCAAGCG ATTTGGCTCG TATACCGGCG TCGGCGTGTT GTCTCAGGTC
AAGTTCGTCC TGACCGACTC ATTTCGTGTC GCGCCGGGCG TCAGTTTCAG TTCCACCCAT
GTCAGCGGCG TGCCGGACAT GATCGACAAC CGTCGCACGG CATTGGCGGG TGCATCGTTG
GAATTCCGCT ACAGGCTGCT CGATCGCGAT GTCATGCCGT TCGGCCTGAC ACTGCACGCC
GCGCCGGGGT GGAATCGGGT CGACGAACTG ACCGGCTTCG ACATCCAAAC CTATGGCAGC
GAATTTGCCG CGCTGATGGA TAAGGAACTG ATCCACAACG CGTTGTTCGC GACCGTCAAT
GTCTGGTTCT CCGGCGGCGC ATCGCGCGCA CTCAGCAACC AATGGAGTCG TGATTCGGAA
CTCGCGGTGA ACGGTGCGCT GTCCTACAAG GTCGGCCCGG ATCTGATCCT CGGCGTCGAG
GCGCGCTACG TGCGGGCCTA TGAGGGGCTC GGTCTCGACC GCTTCGTCGG TGACGCGGTG
TATCTCGGCC CGACCTTCGC GATGCACCTC TCGCACAATT TCGGTGTTTC AGGCACCTGG
AGCACGCAAG TCGCGGGCAG GGCGAGTTGC GAAACGCTGC ATCTCGACCT CCAGGATTTC
GAGCGCCACC AGGCAATGCT GCGCTTCAAC TACTTGTTCT GA
 
Protein sequence
MLLQLGVARV RHAGFRFGIA IGALALGSVL SSSAHAGDAP SWLSTASTSS NSAAVRAIKP 
RAELLDAKAQ SDGVDTEHIF GFSMGSDIGK KGEIELEIEN VGRFSKRFGS YTGVGVLSQV
KFVLTDSFRV APGVSFSSTH VSGVPDMIDN RRTALAGASL EFRYRLLDRD VMPFGLTLHA
APGWNRVDEL TGFDIQTYGS EFAALMDKEL IHNALFATVN VWFSGGASRA LSNQWSRDSE
LAVNGALSYK VGPDLILGVE ARYVRAYEGL GLDRFVGDAV YLGPTFAMHL SHNFGVSGTW
STQVAGRASC ETLHLDLQDF ERHQAMLRFN YLF