Gene Pnec_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0362 
Symbol 
ID6183952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp325850 
End bp326686 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content47% 
IMG OID641671065 
Productconserved hypothetical secreted protein 
Protein accessionYP_001797264 
Protein GI171463151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.807375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.507937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA AATTAACCAT TAATAGACTC CTAGCTTTCA GCCTCTTTCT TGTTGCCACC 
CTCCATTTTT CTTTTACCCA TGCTAGTGAA GGGGCATTTG GCTGGATATA CACCTTAGAT 
TTACAACCCA AAGGGAAGTT AGAGTTTGAG CAACGCGTGC AGCTCAATAA ACAACAAGCT 
TCCGGCATCT ACGATGCTTG GACCGCCAGG ACTGAACTGG AATATGGCCT AAGCAATGAT 
TTACAAATTG CCGGCTATAT CAACTCTTAC TACACCAGCG CCAATCAAAA TTACACTAAC 
CCTGAGGCAT GTGGAGACTC GCCAACTTGT ACGGGCGGTT ATAATATCCT CTCTTCACAT 
GACTCATCTA CCGCCTATAG AAAAAGTGGT ATTGAAGGCG GGTCTCTTGA AGCAATCTAC 
CGAATCATTA ATCCAGTGAC CTCGCCAGTT GGCGTAGGAC TCTACCTCGA ACCTACCTGG 
GGCAGAAATA AAGATGAATT GGAAGCTAGG TTATTACTGC AATCAAACTT TATTGATGAT 
CACTTAGTTT TGGCAGGTTA CGTCGTGGTT GCCAATGAAC GTCTGAAGTT TATTGAAAAC 
GGTAACGTGC CCGAATCCAT GTTGGACTTC TTAATAGGCG CTAGTTATCG CTTCGCCCCC 
AAATGGTCAG CAGGTGTTGA GGCTCGCTTT CACAATGACT ACTCAGAGTT GAACTTGCGC 
AATCAAGTGC AAAGGGCTAC GTTTGTCGGG CCCAATATGC ACTACGCAGC GAAAGATTGG 
TGGGCCACAG GCGCATGGCG CTATCAGCTT GCGGCGGGAC CGCATGGGTG GCGGTGA
 
Protein sequence
MTMKLTINRL LAFSLFLVAT LHFSFTHASE GAFGWIYTLD LQPKGKLEFE QRVQLNKQQA 
SGIYDAWTAR TELEYGLSND LQIAGYINSY YTSANQNYTN PEACGDSPTC TGGYNILSSH 
DSSTAYRKSG IEGGSLEAIY RIINPVTSPV GVGLYLEPTW GRNKDELEAR LLLQSNFIDD 
HLVLAGYVVV ANERLKFIEN GNVPESMLDF LIGASYRFAP KWSAGVEARF HNDYSELNLR 
NQVQRATFVG PNMHYAAKDW WATGAWRYQL AAGPHGWR