12 homologs were found in PanDaTox collection
for query gene Rru_A2279 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A2279  ATP-binding region, ATPase-like  100 
 
 
280 aa  578  1e-164  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2418  putative CheA signal transduction histidine kinases  41.07 
 
 
334 aa  228  1e-58  Burkholderia ambifaria AMMD  Bacteria  normal  0.0895954  n/a   
 
 
-
 
NC_007484  Noc_0060  ATP-binding region, ATPase-like  31.19 
 
 
290 aa  80.1  0.00000000000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2930  putative CheA signal transduction histidine kinase  38.1 
 
 
146 aa  74.3  0.000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0610448  n/a   
 
 
-
 
NC_011126  HY04AAS1_1139  hypothetical protein  23.97 
 
 
244 aa  58.9  0.00000008  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3007  hypothetical protein  30.28 
 
 
311 aa  55.1  0.000001  Opitutus terrae PB90-1  Bacteria  normal  0.0520371  normal  0.102422 
 
 
-
 
NC_008554  Sfum_0880  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.92 
 
 
162 aa  50.4  0.00003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0675  two-component sensor kinase CbrA  30.16 
 
 
975 aa  45.8  0.0007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1500  ATP-binding region, ATPase-like protein  28.03 
 
 
291 aa  45.8  0.0007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0803  histidine kinase  28.57 
 
 
497 aa  45.4  0.001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012918  GM21_2409  PAS/PAC sensor signal transduction histidine kinase  31.06 
 
 
713 aa  42.7  0.006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00581493 
 
 
-
 
NC_013757  Gobs_3755  hypothetical protein  26.47 
 
 
292 aa  42.4  0.009  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
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