Gene Sfum_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_0880 
Symbol 
ID4460505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1086540 
End bp1087028 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content42% 
IMG OID639701644 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_845012 
Protein GI116748325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATG GCTTACAGGG ATCTCTCAAG CTTGCATTAA ATGAGATAAT GACTAATGTT 
TTCGATCATA GTGGATCAGC AAAGGGTTGT TATGTCTGTG CTCAGGCTTA CGAAAAAGAA
GAGATCATAA GGTTGTGTGT TGCTGATTTT GGAGTAGGTC TCTTCACAAG ATTGAAAGAA
AAATACAGTA ACCTGAAGAA TTCCTATGAG GCGATCAAGC TTGCTGTTAG AGAAGGTATC
ACGACCCGAT CCGGGCAAGA AGGTGGATAT GGACTTTCGC ATATACGAAG GTTTATTGAG
GTCAACGCGG GGAAGATGTC GATCCTGACA GGAGATGGAA AGGCGGTCTG GAATTACGGT
GGGCTAAAGA CCAAACTAAG AAAACAGACG ATGCATCTTC CATTTAGTGG AACGATAATT
AACTTGGAAA TAAATGTCGA TCGGGAGAGC GTTTATTTTC TCATCAACAG CGAGGATGAG
ATTTTTTGA
 
Protein sequence
MSDGLQGSLK LALNEIMTNV FDHSGSAKGC YVCAQAYEKE EIIRLCVADF GVGLFTRLKE 
KYSNLKNSYE AIKLAVREGI TTRSGQEGGY GLSHIRRFIE VNAGKMSILT GDGKAVWNYG
GLKTKLRKQT MHLPFSGTII NLEINVDRES VYFLINSEDE IF