Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_0880 |
Symbol | |
ID | 4460505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1086540 |
End bp | 1087028 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639701644 |
Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
Protein accession | YP_845012 |
Protein GI | 116748325 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGATG GCTTACAGGG ATCTCTCAAG CTTGCATTAA ATGAGATAAT GACTAATGTT TTCGATCATA GTGGATCAGC AAAGGGTTGT TATGTCTGTG CTCAGGCTTA CGAAAAAGAA GAGATCATAA GGTTGTGTGT TGCTGATTTT GGAGTAGGTC TCTTCACAAG ATTGAAAGAA AAATACAGTA ACCTGAAGAA TTCCTATGAG GCGATCAAGC TTGCTGTTAG AGAAGGTATC ACGACCCGAT CCGGGCAAGA AGGTGGATAT GGACTTTCGC ATATACGAAG GTTTATTGAG GTCAACGCGG GGAAGATGTC GATCCTGACA GGAGATGGAA AGGCGGTCTG GAATTACGGT GGGCTAAAGA CCAAACTAAG AAAACAGACG ATGCATCTTC CATTTAGTGG AACGATAATT AACTTGGAAA TAAATGTCGA TCGGGAGAGC GTTTATTTTC TCATCAACAG CGAGGATGAG ATTTTTTGA
|
Protein sequence | MSDGLQGSLK LALNEIMTNV FDHSGSAKGC YVCAQAYEKE EIIRLCVADF GVGLFTRLKE KYSNLKNSYE AIKLAVREGI TTRSGQEGGY GLSHIRRFIE VNAGKMSILT GDGKAVWNYG GLKTKLRKQT MHLPFSGTII NLEINVDRES VYFLINSEDE IF
|
| |