| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3007 |
|---|
| Symbol | |
|---|
| ID | 6204238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 3863292 |
|---|
| End bp | 3864227 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641692672 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001819888 |
|---|
| Protein GI | 182414822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0520371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.102422 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTGA CGCTCCCGGA AATCGTCAAT GCCGATGGTC TCCTGCCCTT CTTAACTCTC
ATCGGCGCCG AGGCTGACGA CCGCGAAGTT GTGATCGACT TCAGCGCGCT ACGCAGAGTC
TCGCCGGCGG CGCTGGCCGC CCTGAGCAGC CGCGTGGCGG CCTGGCGGCT GAGGGGAATT
GTCATCCAGG CTGTAGGGCT CGAGCGTTGC TCCATCCTCG GGTATCTGCA GCGCATGGAT
GTGCTCGCAG TCTGCGGTTT CAACCTGCCG GAGATGTTCA GCCGCCACGA TGCGCGCGGT
CGTTTCGTTC CCGTGCGCGT CATCGATCAT CGCGTCCAGG AAATGGGCAG CGAGATGGCC
CTCTGTGTCG CTCCGGGCGG CGACGACTGG GAGCATCCGC TCGCCGGACT CTACGATCTC
GTCTGGTATG TGTTGACCGA GATGGGCAAC AACGTGCGCC AGCACAGCGG CGGTGCCGGC
TTCGCCTGTG CCCAAGTCGG TGCCGCCGAG GGGCTCGTGC GCCTCGCCAT CGCGGACAAC
GGTCGCGGCA TCCGCCAAAG CTTCCGCGAT GCCGGTTTGC CGTGGGCTGC CGCGCTGGAT
GACACCGGCG CCATCCTCAA GGCCCTCGAA CCCCGGATCT CTTCCAAAGG CAGTCCGACC
AATGAAGGCG TGGGCCTCAC GCTCACCGCG AAGATGGCGG AACTGGCCTC AGCTTGGCTC
CTGGTCGCCA GCGGTCGGGG CGTGGTGCGT TGGAATCCTG ATTCTGCTCG ACCTCAGGCC
GGCACGCTGC GCGACGGAGG CAGCTACCCC GGCACCTTGA TTGCCGTCAC GTTCCGACAG
GACCGCGTGC GCGATTTCGC GCAACTCCTG GATCAGGCCA AACGAGCATC TGGGCTCTTG
CGTCCCGGCC AAGGTCGGGC GAAGTTCGAC ACGTGA
|
|---|
| Protein sequence | MHLTLPEIVN ADGLLPFLTL IGAEADDREV VIDFSALRRV SPAALAALSS RVAAWRLRGI
VIQAVGLERC SILGYLQRMD VLAVCGFNLP EMFSRHDARG RFVPVRVIDH RVQEMGSEMA
LCVAPGGDDW EHPLAGLYDL VWYVLTEMGN NVRQHSGGAG FACAQVGAAE GLVRLAIADN
GRGIRQSFRD AGLPWAAALD DTGAILKALE PRISSKGSPT NEGVGLTLTA KMAELASAWL
LVASGRGVVR WNPDSARPQA GTLRDGGSYP GTLIAVTFRQ DRVRDFAQLL DQAKRASGLL
RPGQGRAKFD T
|
|---|
| |