Gene Mlg_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0675 
Symbol 
ID4268470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp744538 
End bp747465 
Gene Length2928 bp 
Protein Length975 aa 
Translation table11 
GC content68% 
IMG OID638125424 
Producttwo-component sensor kinase CbrA 
Protein accessionYP_741519 
Protein GI114319836 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA ACCTCAGCAC CCTCTTCTTC AGTGCCGCGG CCTACCTGCT GCTGCTGTTC 
GTCATCGCCC ACGGCACCGA ACGCCGTTGG CTGCCACGGG CGGTGGCCCA GCATCCGCTG
TTCTACGTCC TGGCCCTGGG CGTCTACGCC ACCACCTGGA GCTTCTACGG CAGTGTCGGG
TTTGCCGAGC GTTACGGTAT CGCCTACCTG CCCATCTACC TGGGCGCGAC CATTGCCTTT
CTGCTCACGC CGGTCCTGCT CATGCCGCTG CTGCGATTGA CCCGCGACCA GCAGCTCACC
TCGCTCTCGG ACGTCTTTGC CTTCCGCTTC CACAGCCAGG CCGCCGGGGT GCTGGTGACG
CTATTGATGC TCACCGGCAT CCTGCCCTAC ATCGCCCTGC AGATCCGCGC CGTGGCCGAG
TCCACCCAGT GGCTGGTGGG TGGCGAGACC TCGCCGCACG TGCTCGCCGT GGTGTTTTGC
ATGACCGTGG CGGTGTTCGC CATCATCTTC GGCGCCCGCC ACGTCACCCC GCGGGAGAAA
CACACCGGTC TGGTGGTGGC CATTGCCTTC GAATCGGTGG TCAAGCTGGC CGCGCTGATG
GTGATCGCCT GGGTGGCCAT GAGCCTGGCC TTCGACGGAC CCATCGGCCT GAACCGCTGG
TTGGCGGACA ATCCGGAGCG CCTGCAGGCC TTTTACCAGC CGGCCCTGGA CGGCCCCTGG
ATCAGCCTGC TCTTTCTGGC CTTCTCGGCG GCGTTCCTAT TGCCCCGCCA GTTCCACATG
ATCTTCACCG AGAACCTCAA ACCACGCAGC CTGCTCAAGG CCAGCTGGGG CTTCCCCGCC
TACCTGCTGG CCCTGGCCAT CTGCATTCCC CCGATCCTCT GGGCCGGACA GGTGCTGCAA
CCGGGCACGG GGCCGGAATA CTACGTGCTG GGGATGGCGG TGCTCAGCGA ATCCCCCGTG
CTGGTGATCG TGACCTACCT GGGGGGGATC TCGGCCGCCA GCGCGATGAT CATCATCTCC
ACCCTCGCCC TGTCCTCGAT GACCCTCAAT CACTTGGTGC TGCCCCTGAC CCGGGCCCGC
CCACGCCAGG ACCTGGACCT GTACGCCACC CTGCGCTGGA CCCGGCGCGC ACTGATCCTG
TTGATGATCG CCGCCGGCTA TTACTTCTTC CTGATGCTGG ACCCGGGCGA GGGGCTGGTG
GACTGGGGCC TGATCTCCTT CCTGGCCATG GCCCAGTTCA TCCCCGGCAT CGTCGGCGTG
CTCTGGTGGA CCCGGGCCAA CGTCTGGGGC TTCATCGCCG GGCTTTTGGG TGGGGCGCTG
GTCTGGCTCG ACGCGCTCTT CCTGCCCGCG CTGGTGGGCA CCGAGCCCTT TTTCCTGTTG
GGCTTCCCCA CCGCACCGGA GTCGGCCTCC GCCATTTACG GCCTGGCCAC CTTCTGGTCG
ATCGCCTTCA ATTCGCTGCT GTTCGCCGCG GTGTCTGTCC TGACCCCGCA AACCGGGCCG
GAGCGCCAGG CCGCCGAGGC CTGTCGCGAC CTGGGCCACC CCATGACCTT CGGCACCCTG
GTGGCCGACT CACCGGCCCA ATTCGTGGTG CAACTGGCGC CGGTGACCGG CGACGAGGCG
GCGCGCGCCG AGGTGGGGAA GGCCCTGGAG GACCTGGGAC TGGACTGGAC GGAGAACCGG
CCGGACCGGC TCAAGCACCT GCGCGACCAG ATCGAGCGCA ATCTCTCGGG CATGATGGGC
CCGGTCCTGG CCCGTATGAT CGTGGACGAG CGCCTGGAAC TGGACCACTC CGCCCATCAG
GCCCATACCC AGAGCATCCG CCAGATCGAG GAACGGCTGG AGTCCTCCAG CAGCCGCTTC
CGCGGGCTGA CCGCCGAGCT GGACCGCCTG CGCCGCTACC ACCGCCAGAT CCTTGAGGAC
CTGCCGCTGG GCGTGATCAC GGTCACGGCA AACCAGCGGA TCGTGCGCTG GAACAGTGCC
ATGCAGCAGC TCACCGGTAT TTGTGCCCGG GATGCCCTGG GCAACCGGCT GGAGGATCTG
GCCCACCCCT GGGGCCGGCT ACTGGGACGG TTCATGGCGC TGGGCCAGGC CCACGCCCAC
GACCAGGCCC AGGTTCCCGG CGACGGCACC CGCTGGCTGA GCCTGCACCG CACCAGTATC
GGGGAGCCGG ACAAGGGCCG CACCAACGAC AGTCTGCTGC TGGTGGAGGA CGTCACCGAG
TTGCGGGTGT TGGAGCGGGA GCTGGCTCAC AGCGAGCGGC TGGCCTCCAT CGGCCGGCTC
GCCGCCGGCG TCGCCCACGA GATTGGCAAC CCGGTCACCG GCGTGGCCTG CCTGGCGCAG
AACCTGCGCG ACGAGGATGA CCCGGAGCTG ATCCGCGAGA GCATGGAACA GATCCTGGAA
CAGACCCACC GGATCAGTAA CATCGTGCAC ACCCTGGTCA GCTACGCCCA TGCCGGCAGC
ACCGAGGAGT CGCCGCCGGA GCCGGTGCGG CTGCACGACG CGGCGGAGGA GGCCCGCCAG
GTGATGGTCC TGAGCCGCCG GGGCAAGGAG ATGGAGTTCG ACAACCGGAT CCCGCCGCAC
CTGGAGGTGG CCGGCGACAG CCAGCGGTTG GTCCAAGTGT TCGTCAATCT CTTCTCCAAC
GCCGCCGACG CCTGCGCCCA GCAGGGCCGG CTGGTGCTCA CCGCCCGGGA GCGGGGCGAC
CGGATCATCG TGCGGGTGGC GGACAACGGG CCGGGCATCC CCGCGTCGGC CCTGAAGAAG
GTGCTGGACC CGTTCTACAC CACCAAACCG GCGGGACAGG GCACAGGGCT GGGCCTGCCG
CTGGTGTACA ACATCATCAC CGATCACGGG GGCACCCTGG ACATTGAATC GGACGTGGGC
GGCACTACAG TGACGCTGGA ACTGCCCGCC CTGGAGGGAG TGGCATAA
 
Protein sequence
MDFNLSTLFF SAAAYLLLLF VIAHGTERRW LPRAVAQHPL FYVLALGVYA TTWSFYGSVG 
FAERYGIAYL PIYLGATIAF LLTPVLLMPL LRLTRDQQLT SLSDVFAFRF HSQAAGVLVT
LLMLTGILPY IALQIRAVAE STQWLVGGET SPHVLAVVFC MTVAVFAIIF GARHVTPREK
HTGLVVAIAF ESVVKLAALM VIAWVAMSLA FDGPIGLNRW LADNPERLQA FYQPALDGPW
ISLLFLAFSA AFLLPRQFHM IFTENLKPRS LLKASWGFPA YLLALAICIP PILWAGQVLQ
PGTGPEYYVL GMAVLSESPV LVIVTYLGGI SAASAMIIIS TLALSSMTLN HLVLPLTRAR
PRQDLDLYAT LRWTRRALIL LMIAAGYYFF LMLDPGEGLV DWGLISFLAM AQFIPGIVGV
LWWTRANVWG FIAGLLGGAL VWLDALFLPA LVGTEPFFLL GFPTAPESAS AIYGLATFWS
IAFNSLLFAA VSVLTPQTGP ERQAAEACRD LGHPMTFGTL VADSPAQFVV QLAPVTGDEA
ARAEVGKALE DLGLDWTENR PDRLKHLRDQ IERNLSGMMG PVLARMIVDE RLELDHSAHQ
AHTQSIRQIE ERLESSSSRF RGLTAELDRL RRYHRQILED LPLGVITVTA NQRIVRWNSA
MQQLTGICAR DALGNRLEDL AHPWGRLLGR FMALGQAHAH DQAQVPGDGT RWLSLHRTSI
GEPDKGRTND SLLLVEDVTE LRVLERELAH SERLASIGRL AAGVAHEIGN PVTGVACLAQ
NLRDEDDPEL IRESMEQILE QTHRISNIVH TLVSYAHAGS TEESPPEPVR LHDAAEEARQ
VMVLSRRGKE MEFDNRIPPH LEVAGDSQRL VQVFVNLFSN AADACAQQGR LVLTARERGD
RIIVRVADNG PGIPASALKK VLDPFYTTKP AGQGTGLGLP LVYNIITDHG GTLDIESDVG
GTTVTLELPA LEGVA