11 homologs were found in PanDaTox collection
for query gene Rcas_1728 on replicon NC_009767
Organism: Roseiflexus castenholzii DSM 13941



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009767  Rcas_1728  hypothetical protein  100 
 
 
639 aa  1216    Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.633344  normal 
 
 
-
 
NC_009523  RoseRS_1002  hypothetical protein  76 
 
 
718 aa  407  1.0000000000000001e-112  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3112  hypothetical protein  38.37 
 
 
636 aa  135  3e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0225252  normal 
 
 
-
 
NC_009972  Haur_4641  hypothetical protein  29.72 
 
 
810 aa  102  2e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0331671  n/a   
 
 
-
 
NC_009767  Rcas_1287  hypothetical protein  37.67 
 
 
305 aa  100  6e-20  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.856161  normal  0.340311 
 
 
-
 
NC_009523  RoseRS_2229  protein kinase  34.03 
 
 
500 aa  54.3  0.000007  Roseiflexus sp. RS-1  Bacteria  normal  0.681599  normal 
 
 
-
 
NC_009523  RoseRS_4621  alpha beta-propellor repeat-containing integrin  46.49 
 
 
830 aa  52.8  0.00002  Roseiflexus sp. RS-1  Bacteria  normal  0.184337  normal  0.0506116 
 
 
-
 
NC_011772  BCG9842_B4210  collagen adhesion protein  32.26 
 
 
2179 aa  50.4  0.0001  Bacillus cereus G9842  Bacteria  normal  0.950826  normal 
 
 
-
 
NC_009972  Haur_4505  PT repeat-containing protein  50 
 
 
453 aa  47.4  0.0008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009973  Haur_5065  hypothetical protein  29.79 
 
 
301 aa  45.1  0.004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.201013  n/a   
 
 
-
 
NC_013739  Cwoe_2285  conserved repeat domain protein  33.33 
 
 
1168 aa  45.1  0.004  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.22424 
 
 
-
 
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