| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3112 |
|---|
| Symbol | |
|---|
| ID | 7269529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3771928 |
|---|
| End bp | 3773838 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643567932 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002464406 |
|---|
| Protein GI | 219849973 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0225252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCAA AACCGTCGCA CTCTGCCAAG TTACCCCCTA GTCGCGGTCG TGCTCCGGCA
CCGTGGACGA TCTGGGAACT TATGGCGATT GCGGTGAGCG TCTTGATGAT TGTGGTACCT
CTCTCGCTAG AGGTGCTGAA TTGGTTGCGC CCGCCGGTTG TGCCGGCGCA GGGGCTGATG
GCAGTGACTG AAACGGCTGT TAGCCTTGAA CAGCGCCCAC CAACGTTTAC GCCGGTAAAT
TCACCCACGC CGGGAACGCC AACCGCAGTG ACGCCGACGG TTGAGACGCC AACCGCAGTG
ACGCCGACGG TTGAGACGCC GACCGCAGCG ACGCCGACGG TTGAGACACC GACCGCAGCG
ACGCCGACGG TTGAGACGCC GACCGCAGCG ACGCCGACGG TTGAGACACC GACCGCAGTG
ACACCGACGG TTGAGACGCC GACATCACTG CCAACCTTGA CTCCTTCACC TACTCCCGGC
ACCACCCGTG TGACTAAGTT TGCTTCATTA AGTACAGCGG CGCCCGGTCA ACCGTTTAGC
TATAGTCTTG CTGTGACAAC CCAAAGTGAT AGTACGCTTA TCCTGACGCT GCGTGATGTG
CTAGCACCTG AGCTTGAAGT ACTCGACGTA TCGGCGGTAG GAGGATCGTG CTTTTTGGGT
CAGACGGTGC TCTGTACGCT AAACGTTAGT AGTCTTAATC CGGCATCAGT AACAATACAG
GTACGGGTAC TTTCATCGGT CAGTGAGGGA ACGGTCATTC CTAATCAAGC GAGACTTGAA
CAGGGTAGTC TGCAGATCGG TGTTTCAAAT GTTGTCAATG TCACGGTTGC CGGATCAGCA
CAGCCCACTC CAGAACCAAC GACTGCAACG GCAACCCCAA CCCCCACGGC AACCCCAACG
GTGCCTACTA CCCCAACATT GGTGACGGCT ATCCCGCCAA CCGTAGTTGT AACCAACACT
CCGCTACCGG CTACCCCACG GCCAACATCT CCGCCACGAC CTCCGGCGCC TCCTGAGCCT
ACTCCAACAG CATCACCTGT ACCACCGCCG CCCACTGCTT CTCCACCGGT GTTACCGACA
GAGCCGCCCA CATCGGCGCC GGTCGTCACG GTTGCGCCGC GTCCAACAGC AACGCCGCGT
CCTCGTCCGC CGGCGCCGCC AACTAATACG CCGACACCGG AGGTGTCGCC AACTCCAACC
GAGCCACCTG CACCGGCTGT GTTCGGTGAG TCTGATCTGC TCTTGCGACT ATCGAGTGAT
TGGGGAAGTG TTTATGCCGG TCAGGACGTG GTCTTTACGG TAATCTTGGG CAACACGCAT
CCATCACAAA CGATCAGTGC CGTCAGTGTT CGTAGTGTTA TGCCGGCGAA CTTGCAGGTG
TTGAATGCCA ATGCAAGTCG CGGGGCCGAT CCGGTGATCA ACGGGCGGAT AGTAACCTAT
GTTGCACCTG ATCTCGCCCC CGGTGAGCGG GTAGAGTTGA CCATTGCAAC CCGTGTTCAG
CCTAACGTGG CAGTGGGTAC GCTCCTTGTG GTTCAAGCGC AGGCGAATTA TAGCGGGTTG
AGTCGGCCGG TCTTTTCCAA TATCAGTACC GTGTTGGTGG TCGGATCACA GCAGGTGGCG
ACGGCTATTC CGACGTTGTC ACCGACGATC GGTCGAACGC CGGTAGTGAC GAGTAGTCCG
GCGGTGACGG CAACAGTGAC GGTAACTGCG TCGGTGACGG TGACGCCGAT GACGGGTGGC
AAGGTGACCG CTACCGCCAC ACCCGTACCA CCGGCGGCAG GTGGTCAAAG CGGTAGTCAA
GCACCGCTAC CGAATACGAG TGCCGGGATA CCCTTCCTTG GTGTGTTATT GCTGGGTGCT
ACCTTGCTAA CCCGCACAAT ACGACTCCAT CGCGCTCGTG AACGGATTTG A
|
|---|
| Protein sequence | MPPKPSHSAK LPPSRGRAPA PWTIWELMAI AVSVLMIVVP LSLEVLNWLR PPVVPAQGLM
AVTETAVSLE QRPPTFTPVN SPTPGTPTAV TPTVETPTAV TPTVETPTAA TPTVETPTAA
TPTVETPTAA TPTVETPTAV TPTVETPTSL PTLTPSPTPG TTRVTKFASL STAAPGQPFS
YSLAVTTQSD STLILTLRDV LAPELEVLDV SAVGGSCFLG QTVLCTLNVS SLNPASVTIQ
VRVLSSVSEG TVIPNQARLE QGSLQIGVSN VVNVTVAGSA QPTPEPTTAT ATPTPTATPT
VPTTPTLVTA IPPTVVVTNT PLPATPRPTS PPRPPAPPEP TPTASPVPPP PTASPPVLPT
EPPTSAPVVT VAPRPTATPR PRPPAPPTNT PTPEVSPTPT EPPAPAVFGE SDLLLRLSSD
WGSVYAGQDV VFTVILGNTH PSQTISAVSV RSVMPANLQV LNANASRGAD PVINGRIVTY
VAPDLAPGER VELTIATRVQ PNVAVGTLLV VQAQANYSGL SRPVFSNIST VLVVGSQQVA
TAIPTLSPTI GRTPVVTSSP AVTATVTVTA SVTVTPMTGG KVTATATPVP PAAGGQSGSQ
APLPNTSAGI PFLGVLLLGA TLLTRTIRLH RARERI
|
|---|
| |