Gene Haur_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4505 
Symbol 
ID5736356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5768749 
End bp5770110 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content54% 
IMG OID641281668 
ProductPT repeat-containing protein 
Protein accessionYP_001547265 
Protein GI159901018 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGA CACTGCGACG ATGGACAACG CGGGTTGTGC TACTTGCAAC AATGTTGATG 
GCAGGTGGTC CAAGTGCCAG CTTTGCCAAT GTGAGCAAAG GCGTAGAATC AGCCAGTGTT
GAGACAGTCG TTGAACCAAC TGCTGAACCA ACTGCTGAGC CAACTGCTGA ACTAACCGCT
GAGCCAACCG CTGAGCCAAC CGGAACAGCA GCCCCAACCG CAGCCCCAAC CGGAACAGCA
GCCCCAACCG CAGCTCCAGT CTGTGACCCA AAGGCTGATC TTTCGGGTTG GTTCTCAAGC
AATACCGTCG GCAAGATTTG GAATAAATCA AGCACCTGCT CCTACGATGT AGGTATGGCT
TCGTATCAAA AATTTGATGA AATCATCGAT CACCAATTGA TTTATTCGTG GGCAATTGGC
CGAGTTGGCC CAAAAACAAC TGTTTCTTTA AGCGTTTCAG TGCCCGATTG TGCTACCCAA
ATTGATGTAT TCTATGGGCC TGTATTGCAC TCGCTCGATG GTCAACGCTA TGGCGAGCGC
TTGCTCTCAT CTCGCCACCT TGGCGGAACC AGCTATTGTG GTGTAACAAC TCCAACCAAC
ACGCCAGAAC CAACGGCTGA GCCAACGGTT GCCCCAACCA ATACGCCAGA ACCAACCGCC
TACCCAACGC CAACAGCAGA ACCAACAGTT GCGCCAACCA ATACACCAGA ACCAACGGCA
GAACCAACAG TTGCACCAAC TAACACGCCA GAACCAACGG TTGCGCCAAC GGTTGCACCA
ACTAACACGC CAGAACCAAC GGTTGCGCCA ACCAACACGC CAGAACCAAC TGCCTACCCA
ACACCAACCG CTGTGCCAAC CGCGACCAAG ACACCAGTCC CAACCGCGAC GAAGACACCC
GCGCCAACTG CAACCAGCAC GCCAGCGCCA ACCGCGACGA AGACACCAGT CCCAACCGCG
ACGAAGACAC CCGCGCCAAC TGCAACCAGC ACGCCTACTG GTAAAGATTG TACCTATACC
CAAGGCTACT GGAAGAATCA CCCAAGTGCT TGGCCAGTTA CGAGCTTGAG CATTGGTGGT
GTGGTTTACA GCCAAAGCCA ATTGATGGCA ATTTTCAACA CCTCGCCACG TGGTGATGCC
ACCTACATCT TGGCTCACCA ATTGATCGCG GCCAAGTTGA ATGTTGCTCA AGGTGCTAAT
GGCAGCACAG TTAATGCAAC GATCGCTGCT GCTGACGCTT GGTTGCAACA ATATCCATTG
GGCAGCAAAC CAAGTGGCTC AGCCTCCAAC ACTGGCACCA GCTACGCCAC TCAATTGGAT
AACTTCAACA ATGGCGTAAT TGGCCCAGGC CACTGCGACT AA
 
Protein sequence
MTPTLRRWTT RVVLLATMLM AGGPSASFAN VSKGVESASV ETVVEPTAEP TAEPTAELTA 
EPTAEPTGTA APTAAPTGTA APTAAPVCDP KADLSGWFSS NTVGKIWNKS STCSYDVGMA
SYQKFDEIID HQLIYSWAIG RVGPKTTVSL SVSVPDCATQ IDVFYGPVLH SLDGQRYGER
LLSSRHLGGT SYCGVTTPTN TPEPTAEPTV APTNTPEPTA YPTPTAEPTV APTNTPEPTA
EPTVAPTNTP EPTVAPTVAP TNTPEPTVAP TNTPEPTAYP TPTAVPTATK TPVPTATKTP
APTATSTPAP TATKTPVPTA TKTPAPTATS TPTGKDCTYT QGYWKNHPSA WPVTSLSIGG
VVYSQSQLMA IFNTSPRGDA TYILAHQLIA AKLNVAQGAN GSTVNATIAA ADAWLQQYPL
GSKPSGSASN TGTSYATQLD NFNNGVIGPG HCD