| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5065 |
|---|
| Symbol | |
|---|
| ID | 5737023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009973 |
|---|
| Strand | - |
|---|
| Start bp | 78183 |
|---|
| End bp | 79088 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641282230 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001547821 |
|---|
| Protein GI | 159901575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.201013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TTGAAACCGT GATGTTTGGG ATGGCGGTCG TGATCGCGCT GGTGTTGGGT
TTTCAGAAGC TGTTTCCGGC GCAATCGAGC GCAGCCCAGC AGCCGATGAG CCTGACCCCC
TCGCCCGAAC CAACCGACCT GCCGACTGCC ACCCCGCGCC CAACCGAGGT GCCGAATCCA
ACCGCCACCC CACGCCCGAC GGACGCACCG CTGCCAACCA GCACGCCGAG CGATGGCGCG
ACGGTGACTC CCCGCCCAAC CCGCCAGCCG CTGGAGATTA CGTCAACGCC GGTTGATTTG
ACCGCCACCC CAACGACGAT GCCGACCGCA ACCCCCAGTG ATGGCGCGAC GGTGACTCCG
GTGACGGCCT TGCCCGATCT GGTGCTGGAG AAAGTATCCG ATCACCAAAC GGTGGCAATT
GGCGAGAGTC TGCGCTGGAC GCTGACCGTC CACAATCGCG GCAGTGCCCC AGCGGCGAAT
GTCTTGGTGC GTGATGTATT GCCTGCCTTT TTTCGCGGCC TGCACGTCAC GACCAGTGTG
GGCGAGGCAA CGCTAGTCGA TGGGATCGTC AGTGTTTACA TTGCGGAATT GTCTGCTGGA
CAAACTGTGA CGATTTGGAT TGATGGCACG GTTGTCTCGC TCGACGGCCC CTTGACCAAC
CTTGCCCAAG CCTCAACGAC GACGACTGAA ACCTCAACTG AGAATAACAC GGCGTGGTCG
AGCGTCACCC CCAAAGCGGC AGGCGGGGTG CAGCCAAGCG CGACCCCACG GCCTGCTGCT
CAGCCGCAGC GTACCTTTCC GGTGACGGCG AGCGATGACG GAATGCCCGT TGGGGTGCCG
ATTGGCTTGG TGGTATTGGT GACGCTGGTG GCGGCGTGGC TGCTCTGGCC TCGGAGGCTG
GCATGA
|
|---|
| Protein sequence | MKKLETVMFG MAVVIALVLG FQKLFPAQSS AAQQPMSLTP SPEPTDLPTA TPRPTEVPNP
TATPRPTDAP LPTSTPSDGA TVTPRPTRQP LEITSTPVDL TATPTTMPTA TPSDGATVTP
VTALPDLVLE KVSDHQTVAI GESLRWTLTV HNRGSAPAAN VLVRDVLPAF FRGLHVTTSV
GEATLVDGIV SVYIAELSAG QTVTIWIDGT VVSLDGPLTN LAQASTTTTE TSTENNTAWS
SVTPKAAGGV QPSATPRPAA QPQRTFPVTA SDDGMPVGVP IGLVVLVTLV AAWLLWPRRL
A
|
|---|
| |