Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1287 |
Symbol | |
ID | 5538759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1659779 |
End bp | 1660696 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893425 |
Product | hypothetical protein |
Protein accession | YP_001431402 |
Protein GI | 156741273 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.856161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.340311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCACT GTCATCGAAC GGGCGCGCTG CGCGTGTCCT CTAGAAGAAA GGCTCTCATG ATGTCAGCGG CGCGTCATTC TGCCGGACAC CGGTTGGTCG GATTCTGCAT AACGACTCTG CTCCTCTGCC TGGCAATCAT CGCACACGGC GTTACCGCTG CCGATCAGGG TGAAGCGTCG CAAACGCCAA CATCAACACC CACACCGGAG CACACCACTC TCGCGATCGG ATCGGCGCCG TTAACATTGA CCAAGACCGC CTCAACCGAT GCAGTGCTGC CAGGTCAATC GTTTACCTAC ACATTGCGCA TCACCAGCAA CCGCGATCAG GCGCGTATCG AAGTGCGCGA TATGCTGGAT CGCGGGGTTG AGGTCATCGG CATCGAGAGT GCGTCGGGGG CGTGCACCGG GACGGGGATG ATCATGTGCA CGGTGCAGGT GACGGCGCAG GAACCGGCGA CGATTCTGAT CACTGTGCGC GCATCCGCCA CGGTTGCCCC CAACTCTTTG CTGATTGGGC AGGCACTGGC TCAAGACGAC CGGGATTTTA CCGCTGCGTC AGAGCGGGTG GCGGTGCGTG TCGTCGCACC GCCGCCTTCG ATGTCTGCAC CGGTCGCTAC GCTTCCACCA TCCCCTGAAG CGCCGTCCGC TGATGCGGCG CTGCCTCCTG ATGCGCCAGA GTCACGCGCT GCATTGCGCA CAGGCGCCGT GCTTTCTCGT GCGCCACGTC CAACCGCCAC AATCTTTCCG CCTCCGGTTA CAGCGCCGCT CTCGCGCGCT GCCAGCGCCA TGGTCGGCGC CACTGATCCG GAATCGGCAG CCCCCATCGA TGCACCGACA CAAGCGCCAG CAGCGGCGCC GCATATAGGA TCATATGCAG CGTCGTGGCT GGACCTGGTG ACGACTGTCA ACCCTTGA
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Protein sequence | MMHCHRTGAL RVSSRRKALM MSAARHSAGH RLVGFCITTL LLCLAIIAHG VTAADQGEAS QTPTSTPTPE HTTLAIGSAP LTLTKTASTD AVLPGQSFTY TLRITSNRDQ ARIEVRDMLD RGVEVIGIES ASGACTGTGM IMCTVQVTAQ EPATILITVR ASATVAPNSL LIGQALAQDD RDFTAASERV AVRVVAPPPS MSAPVATLPP SPEAPSADAA LPPDAPESRA ALRTGAVLSR APRPTATIFP PPVTAPLSRA ASAMVGATDP ESAAPIDAPT QAPAAAPHIG SYAASWLDLV TTVNP
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