14 homologs were found in PanDaTox collection
for query gene RPD_0446 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007958  RPD_0446  transcriptional regulator AbrB  100 
 
 		 89 aa  175  2e-43  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.627341  normal  0.288224 
 
 
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NC_011901  Tgr7_3222  AbrB family transcriptional regulator  39.51 
 
 		 82 aa  58.9  0.00000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
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NC_007484  Noc_2538  AbrB family transcriptional regulator  42.5 
 
 		 89 aa  58.2  0.00000004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0127066  n/a   
 
 
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NC_012850  Rleg_3513  transcriptional regulator, AbrB family  46.25 
 
 		 87 aa  55.5  0.0000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.674583 
 
 
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NC_011662  Tmz1t_2685  transcriptional regulator, AbrB family  37.18 
 
 		 78 aa  53.1  0.000001  Thauera sp. MZ1T  Bacteria  normal  0.561513  n/a   
 
 
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NC_009719  Plav_2596  AbrB family transcriptional regulator  34.18 
 
 		 79 aa  47.8  0.00005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.567347  normal  0.158945 
 
 
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NC_008639  Cpha266_2120  AbrB family transcriptional regulator  36.99 
 
 		 74 aa  45.4  0.0002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.181365  n/a   
 
 
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NC_010803  Clim_1458  transcriptional regulator, AbrB family  35.14 
 
 		 74 aa  44.7  0.0005  Chlorobium limicola DSM 245  Bacteria  normal  0.75174  n/a   
 
 
-
 
NC_007484  Noc_2044  AbrB family transcriptional regulator  33.8 
 
 		 82 aa  42.7  0.001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
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NC_013922  Nmag_2925  transcriptional regulator, AbrB family  36.49 
 
 		 94 aa  43.5  0.001  Natrialba magadii ATCC 43099  Archaea  normal  0.621322  n/a   
 
 
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NC_009483  Gura_3174  AbrB family transcriptional regulator  36.36 
 
 		 76 aa  41.6  0.004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
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NC_009943  Dole_3166  AbrB family transcriptional regulator  35.14 
 
 		 75 aa  41.6  0.004  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000261549  n/a   
 
 
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NC_012028  Hlac_3255  transcriptional regulator, AbrB family  36.11 
 
 		 93 aa  41.6  0.004  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
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NC_007778  RPB_1921  AbrB family transcriptional regulator  33.33 
 
 		 84 aa  40  0.009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.142109  normal  1 
 
 
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