| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2538 |
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| Symbol | |
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| ID | 3704694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 2889675 |
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| End bp | 2889944 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637739017 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_344521 |
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| Protein GI | 77165996 |
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| COG category | [K] Transcription |
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| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0127066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACGA CTCTTACCAG TAAAGGCCAA GTTACGGTGC CGAAGAAGAT TCGCGATTAT
CTCGGCTTGC GCCCAGGATC AGCGGTTGAT TTTTCCCTTG GACCCCACGG CGAAGTGATC
CTGCGTCCGG CGGAAGATAC CCCACCAGAA CGCCGCAAGG ATCGTTTCGG CAAGCTGAGA
GGTACGCTCG ATACCGGCAG GACTACCGAT GAATGGATGC ATTTACTGCG TGGCTACGAT
GCTGACGCAA GTGATCCTGG CCTGAAATGA
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| Protein sequence | MATTLTSKGQ VTVPKKIRDY LGLRPGSAVD FSLGPHGEVI LRPAEDTPPE RRKDRFGKLR
GTLDTGRTTD EWMHLLRGYD ADASDPGLK
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