More than 300 homologs were found in PanDaTox collection
for query gene Psyr_3604 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_1790  acyl-CoA dehydrogenase family protein  84.89 
 
 
397 aa  664    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3604  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  100 
 
 
393 aa  797    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.339437 
 
 
-
 
NC_002947  PP_3226  acyl-CoA dehydrogenase-related protein  72.73 
 
 
380 aa  534  1e-151  Pseudomonas putida KT2440  Bacteria  normal  0.690171  normal 
 
 
-
 
NC_010322  PputGB1_2538  acyl-CoA dehydrogenase type 2  70.65 
 
 
378 aa  537  1e-151  Pseudomonas putida GB-1  Bacteria  normal  0.844573  decreased coverage  0.00557828 
 
 
-
 
NC_012560  Avin_21570  Acyl-CoA dehydrogenase family protein  71.43 
 
 
400 aa  512  1e-144  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_31100  Acyl-CoA dehydrogenase family protein  60.41 
 
 
396 aa  473  1e-132  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2659  acyl-CoA dehydrogenase type 2  62.23 
 
 
390 aa  454  1.0000000000000001e-126  Caulobacter sp. K31  Bacteria  normal  normal  0.387509 
 
 
-
 
NC_009485  BBta_1981  putative acyl-CoA dehydrogenase  56.59 
 
 
388 aa  419  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0523  acyl-CoA dehydrogenase type 2  52.2 
 
 
407 aa  404  1e-111  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3873  Acyl-CoA dehydrogenase type 2 domain protein  54.21 
 
 
411 aa  389  1e-107  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2217  Acyl-CoA dehydrogenase  50.99 
 
 
402 aa  375  1e-103  Cupriavidus metallidurans CH34  Bacteria  normal  0.0777616  normal  0.101595 
 
 
-
 
NC_008463  PA14_30500  putative acyl-CoA dehydrogenase  55.94 
 
 
383 aa  376  1e-103  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4462  Acyl-CoA dehydrogenase type 2 domain  49.38 
 
 
402 aa  372  1e-102  Ralstonia pickettii 12J  Bacteria  normal  normal  0.542965 
 
 
-
 
NC_012857  Rpic12D_4596  Acyl-CoA dehydrogenase type 2 domain protein  49.38 
 
 
402 aa  372  1e-102  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1390  Acyl-CoA dehydrogenase type 2 domain protein  53.8 
 
 
384 aa  372  1e-102  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00428618  n/a   
 
 
-
 
NC_010552  BamMC406_4154  acyl-CoA dehydrogenase domain-containing protein  49.88 
 
 
440 aa  364  1e-99  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.233252 
 
 
-
 
NC_008391  Bamb_3681  acyl-CoA dehydrogenase domain-containing protein  49.38 
 
 
442 aa  357  1.9999999999999998e-97  Burkholderia ambifaria AMMD  Bacteria  normal  0.902105  normal 
 
 
-
 
NC_007348  Reut_B5046  Acyl-CoA dehydrogenase, C-terminal  50.62 
 
 
402 aa  354  2e-96  Ralstonia eutropha JMP134  Bacteria  normal  0.721222  n/a   
 
 
-
 
NC_010515  Bcenmc03_3260  acyl-CoA dehydrogenase domain-containing protein  49.36 
 
 
459 aa  353  4e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4333  acyl-CoA dehydrogenase type 2  51.56 
 
 
440 aa  350  2e-95  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.619225  normal  0.220534 
 
 
-
 
NC_011666  Msil_2670  Acyl-CoA dehydrogenase type 2 domain protein  50.57 
 
 
389 aa  347  1e-94  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007511  Bcep18194_B1754  Acyl-CoA dehydrogenase  50.66 
 
 
454 aa  343  2.9999999999999997e-93  Burkholderia sp. 383  Bacteria  normal  normal  0.0688656 
 
 
-
 
NC_008061  Bcen_4109  Acyl-CoA dehydrogenase, type 2-like  49.87 
 
 
452 aa  337  1.9999999999999998e-91  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.381793  n/a   
 
 
-
 
NC_008543  Bcen2424_4257  acyl-CoA dehydrogenase type 2  49.87 
 
 
452 aa  337  1.9999999999999998e-91  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00125865  normal  0.295507 
 
 
-
 
NC_008688  Pden_5014  acyl-CoA dehydrogenase type 2  47.67 
 
 
384 aa  337  2.9999999999999997e-91  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4897  acyl-CoA dehydrogenase domain protein  52.99 
 
 
381 aa  332  6e-90  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5139  putative acyl-CoA dehydrogenase  46.32 
 
 
399 aa  322  6e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0630041 
 
 
-
 
NC_010581  Bind_1847  acyl-CoA dehydrogenase type 2  45.25 
 
 
382 aa  314  1.9999999999999998e-84  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.25699  normal 
 
 
-
 
NC_010172  Mext_1170  acyl-CoA dehydrogenase domain-containing protein  49.19 
 
 
381 aa  311  9e-84  Methylobacterium extorquens PA1  Bacteria  normal  0.665446  normal  0.0188326 
 
 
-
 
NC_011757  Mchl_1330  acyl-CoA dehydrogenase domain protein  49.73 
 
 
381 aa  309  5e-83  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.135454  normal  0.523473 
 
 
-
 
NC_009485  BBta_3307  putative acyl-CoA dehydrogenase  46.61 
 
 
394 aa  308  1.0000000000000001e-82  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5653  acyl-CoA dehydrogenase type 2  44.59 
 
 
410 aa  305  1.0000000000000001e-81  Sinorhizobium medicae WSM419  Bacteria  normal  0.329683  normal  0.865966 
 
 
-
 
NC_013131  Caci_2770  ccyl-CoA dehydrogenase type 2 domain protein  42.53 
 
 
406 aa  294  2e-78  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.271017  normal 
 
 
-
 
NC_010505  Mrad2831_4840  acyl-CoA dehydrogenase type 2  49.71 
 
 
381 aa  274  2.0000000000000002e-72  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.910203 
 
 
-
 
NC_009485  BBta_2584  putative acyl-CoA dehydrogenase  42.44 
 
 
398 aa  273  4.0000000000000004e-72  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0375347 
 
 
-
 
NC_011988  Avi_5178  acyl-CoA dehydrogenase-related protein  39.67 
 
 
393 aa  256  5e-67  Agrobacterium vitis S4  Bacteria  normal  0.897204  n/a   
 
 
-
 
NC_009921  Franean1_2020  acyl-CoA dehydrogenase type 2  38.65 
 
 
394 aa  253  6e-66  Frankia sp. EAN1pec  Bacteria  normal  0.692035  normal  0.294025 
 
 
-
 
NC_011981  Avi_7179  acyl-CoA dehydrogenase  40.31 
 
 
394 aa  244  1.9999999999999999e-63  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0478  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
396 aa  228  1e-58  Roseiflexus sp. RS-1  Bacteria  normal  0.859047  normal 
 
 
-
 
NC_009767  Rcas_0150  acyl-CoA dehydrogenase domain-containing protein  36.13 
 
 
394 aa  228  1e-58  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4313  acyl-CoA dehydrogenase type 2 domain protein  37.96 
 
 
397 aa  220  3.9999999999999997e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2419  Acyl-CoA dehydrogenase  38.93 
 
 
332 aa  215  9.999999999999999e-55  Frankia sp. CcI3  Bacteria  normal  0.238624  normal  0.291589 
 
 
-
 
NC_009921  Franean1_3756  acyl-CoA dehydrogenase type 2  34.13 
 
 
418 aa  210  3e-53  Frankia sp. EAN1pec  Bacteria  normal  0.326681  normal 
 
 
-
 
NC_013205  Aaci_0955  Acyl-CoA dehydrogenase type 2 domain protein  35.98 
 
 
398 aa  203  5e-51  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1183  Acyl-CoA dehydrogenase type 2 domain protein  32.6 
 
 
390 aa  200  3e-50  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_2310  acyl-CoA dehydrogenase type 2  31.62 
 
 
384 aa  191  2.9999999999999997e-47  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.154104  n/a   
 
 
-
 
NC_009632  SaurJH1_2352  acyl-CoA dehydrogenase type 2  31.62 
 
 
384 aa  191  2.9999999999999997e-47  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.657423  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2881  acyl-CoA dehydrogenase type 2  33.14 
 
 
382 aa  187  3e-46  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.255861  n/a   
 
 
-
 
NC_002976  SERP1866  acyl-CoA dehydrogenase-related protein  30.81 
 
 
381 aa  178  1e-43  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2142  putative acyl-CoA dehydrogenase, short-chain specific  30.71 
 
 
382 aa  178  2e-43  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A3128  putative acyl-CoA dehydrogenase, short-chain specific  30.71 
 
 
382 aa  177  3e-43  Bacillus cereus AH187  Bacteria  hitchhiker  0.000407188  n/a   
 
 
-
 
NC_006274  BCZK2818  acyl-CoA dehydrogenase, short-chain specific  30.71 
 
 
382 aa  177  4e-43  Bacillus cereus E33L  Bacteria  normal  0.149479  n/a   
 
 
-
 
NC_011773  BCAH820_3109  putative acyl-CoA dehydrogenase, short-chain specific  30.71 
 
 
382 aa  176  9e-43  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS2889  acyl-CoA dehydrogenase, short-chain specific  30.71 
 
 
382 aa  175  9.999999999999999e-43  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00742766  n/a   
 
 
-
 
NC_007530  GBAA_3105  acyl-CoA dehydrogenase, short-chain specific  30.71 
 
 
382 aa  175  9.999999999999999e-43  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.362062  n/a   
 
 
-
 
NC_011725  BCB4264_A3094  putative acyl-CoA dehydrogenase, short-chain specific  30.45 
 
 
382 aa  175  9.999999999999999e-43  Bacillus cereus B4264  Bacteria  normal  0.952201  n/a   
 
 
-
 
NC_005957  BT9727_2857  acyl-CoA dehydrogenase, short-chain specific  30.45 
 
 
382 aa  173  5e-42  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.25076  n/a   
 
 
-
 
NC_003909  BCE_3126  acyl-CoA dehydrogenase, short-chain specific, putative  31.45 
 
 
382 aa  172  6.999999999999999e-42  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00757934  n/a   
 
 
-
 
NC_009674  Bcer98_2066  acyl-CoA dehydrogenase type 2  30.03 
 
 
384 aa  162  1e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.335702  n/a   
 
 
-
 
NC_012793  GWCH70_1626  Acyl-CoA dehydrogenase type 2 domain protein  31.61 
 
 
387 aa  154  2e-36  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2547  Acyl-CoA dehydrogenase type 2 domain protein  30.33 
 
 
392 aa  142  9.999999999999999e-33  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_2304  acyl-CoA dehydrogenase type 2  30.21 
 
 
392 aa  138  2e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0799931  n/a   
 
 
-
 
NC_008025  Dgeo_1231  Acyl-CoA dehydrogenase, type 2-like protein  33.33 
 
 
384 aa  129  1.0000000000000001e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.279686  normal 
 
 
-
 
NC_008254  Meso_2091  Acyl-CoA dehydrogenase, type 2-like  28.01 
 
 
389 aa  114  3e-24  Chelativorans sp. BNC1  Bacteria  normal  0.424709  n/a   
 
 
-
 
NC_009953  Sare_4695  acyl-CoA dehydrogenase type 2  28.88 
 
 
387 aa  105  1e-21  Salinispora arenicola CNS-205  Bacteria  normal  0.46169  normal  0.258533 
 
 
-
 
NC_013159  Svir_20400  acyl-CoA dehydrogenase  28.46 
 
 
396 aa  102  2e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.170444  normal 
 
 
-
 
NC_010322  PputGB1_3342  acyl-CoA dehydrogenase type 2  28.5 
 
 
410 aa  101  2e-20  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0146  Acyl-CoA dehydrogenase type 2 domain-containing protein  26.88 
 
 
382 aa  100  4e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.658373 
 
 
-
 
NC_013440  Hoch_3775  acyl-CoA dehydrogenase domain protein  27.04 
 
 
386 aa  99.4  9e-20  Haliangium ochraceum DSM 14365  Bacteria  normal  0.212433  normal  0.155443 
 
 
-
 
NC_009380  Strop_4265  acyl-CoA dehydrogenase type 2  29.2 
 
 
387 aa  98.6  1e-19  Salinispora tropica CNB-440  Bacteria  normal  normal  0.184931 
 
 
-
 
NC_014150  Bmur_1546  acyl-CoA dehydrogenase domain protein  24.79 
 
 
381 aa  98.2  2e-19  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0109  putative acyl-CoA dehydrogenase  29.32 
 
 
410 aa  96.7  6e-19  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2826  acyl-CoA dehydrogenase domain protein  27.85 
 
 
385 aa  96.7  7e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6601  Acyl-CoA dehydrogenase-like protein  26.68 
 
 
425 aa  96.3  9e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0223249  normal  0.275726 
 
 
-
 
NC_014212  Mesil_1085  acyl-CoA dehydrogenase domain protein  27.17 
 
 
373 aa  95.9  1e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  0.863384  normal 
 
 
-
 
NC_013510  Tcur_2779  acyl-CoA dehydrogenase domain protein  27.48 
 
 
391 aa  95.1  2e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0102369  n/a   
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  23.87 
 
 
382 aa  92  1e-17  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_006670  CNA04330  Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor, putative  28.07 
 
 
417 aa  92  2e-17  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0137  hypothetical protein  28.84 
 
 
405 aa  92  2e-17  Burkholderia xenovorans LB400  Bacteria  normal  0.209836  normal 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  23.83 
 
 
379 aa  91.7  2e-17  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  24.35 
 
 
381 aa  90.9  3e-17  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3296  putative acyl-CoA dehydrogenase  26.61 
 
 
409 aa  90.5  4e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.187192 
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  24.35 
 
 
381 aa  90.1  5e-17  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  24.35 
 
 
381 aa  90.1  5e-17  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  24.35 
 
 
381 aa  90.1  6e-17  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  24.35 
 
 
381 aa  90.1  6e-17  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  24.35 
 
 
381 aa  90.1  6e-17  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_014158  Tpau_1370  Acyl-CoA dehydrogenase type 2 domain protein  32.46 
 
 
395 aa  90.1  6e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1386  acyl-CoA dehydrogenase domain protein  26.67 
 
 
385 aa  89.7  8e-17  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_3662  acyl-CoA dehydrogenase domain-containing protein  29.2 
 
 
387 aa  89.7  8e-17  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000000131881 
 
 
-
 
NC_002947  PP_4064  acyl-CoA dehydrogenase domain-containing protein  28.91 
 
 
424 aa  89.4  1e-16  Pseudomonas putida KT2440  Bacteria  normal  0.322511  hitchhiker  0.0046695 
 
 
-
 
NC_010501  PputW619_1812  acyl-CoA dehydrogenase domain-containing protein  29.2 
 
 
387 aa  89  1e-16  Pseudomonas putida W619  Bacteria  normal  0.0871457  normal  0.415388 
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  24.08 
 
 
381 aa  89  1e-16  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  24.54 
 
 
381 aa  89  1e-16  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  24.54 
 
 
381 aa  89  1e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2584  butyryl-CoA dehydrogenase  24.43 
 
 
379 aa  89  1e-16  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2286  butyryl-CoA dehydrogenase  24.43 
 
 
379 aa  89  1e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1777  acyl-CoA dehydrogenase domain-containing protein  29.2 
 
 
387 aa  88.6  2e-16  Pseudomonas putida F1  Bacteria  normal  normal  0.0186488 
 
 
-
 
NC_009972  Haur_3567  acyl-CoA dehydrogenase domain-containing protein  25.33 
 
 
382 aa  88.2  2e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  24.09 
 
 
380 aa  88.6  2e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
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