11 homologs were found in PanDaTox collection
for query gene PsycPRwf_1929 on replicon NC_009524
Organism: Psychrobacter sp. PRwf-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009524  PsycPRwf_1929  hypothetical protein  100 
 
 
372 aa  736    Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00000777643  normal 
 
 
-
 
NC_007969  Pcryo_1566  hypothetical protein  54.55 
 
 
539 aa  67  0.0000000005  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_1406  hypothetical protein  54.55 
 
 
531 aa  65.9  0.000000001  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.155703 
 
 
-
 
NC_012560  Avin_34230  hypothetical protein  35.82 
 
 
946 aa  49.7  0.00007  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1895  peptidoglycan-binding LysM  42.86 
 
 
883 aa  49.7  0.00009  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3818  hypothetical protein  37.5 
 
 
947 aa  45.8  0.001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.899071  n/a   
 
 
-
 
NC_007005  Psyr_1661  hypothetical protein  37.5 
 
 
948 aa  45.8  0.001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_1017  hypothetical protein  36.67 
 
 
888 aa  45.1  0.002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2018  hypothetical protein  32.93 
 
 
927 aa  43.9  0.004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0727508  n/a   
 
 
-
 
NC_011206  Lferr_1730  Tfp pilus assembly protein FimV-like protein  42.11 
 
 
731 aa  43.5  0.006  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0317233  hitchhiker  0.00941699 
 
 
-
 
NC_011761  AFE_2072  hypothetical protein  42.11 
 
 
722 aa  43.5  0.006  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.813162  n/a   
 
 
-
 
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