| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1017 |
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| Symbol | |
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| ID | 3707278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1126161 |
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| End bp | 1128827 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637737522 |
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| Product | hypothetical protein |
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| Protein accession | YP_343055 |
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| Protein GI | 77164530 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCGGA AGACGATTGT CAGCGTATCG GTAGCCGGGT TGCTAGCGGC CTCCTCATCC
TGGGAGGCGT ATTCCTTGGG GATAGGGGGA ATTAGTTTGA AATCTGGGTT GAATCAGCCG
TTTAAAGCGG AGATTCCCCT GCATGCGGTG CGCGAGAATT CTCTAGAAGA TATTAAGGTA
AAATTGGCGC CTAGCGAAGA TTTTTTTCGG GCGGGGCTAG ATCGGGCATT GGTGCTGAGC
AACCTCCGCT TTCGCCCGCT GCGTAAAGAG ACGGGTGAGA CGGTTATTGA AGTGACCTCG
CAAGGGCCTA TTCGTGAACC CTTTCTTGAC TTTCTGGTGG CTGTAACTTG GCCTCAGGGA
CACCTGTTAC GGGAATATAC GGTACTGCTG GATCCTCCTT TTCTGATGGA GCCAGGCCCT
GCCATTGTTA GCTCCATTGC GAGTGTGCAA GACACTGTGG CGCCGGTTAC ACCGCAAAAG
GCAGAAACCT GGAGCGTGCA GATTCCAGAG CCCCTAGTCG AGAGCACCAT GGTTTCTTCA
ACGGCTAAAG CGGATTCCTC TGCCTATGGG CCTATCCGAC CGGCTGAGAC GTTGTGGCCT
ATCGCGCAAC GGGTGCGGTC TAGTTCTTCG ATTGCTCCTC AACAAATGAT GCTGGCGCTG
CTACGAGCTA ATCCGGATGT CTTTTTGCAC GGTAATATCA ATGGGTTGAA GGTTGGACGG
ATGCTCACAA TACCAGCCGA AGAGGAAGCG TTAAAGCTGA CCTTTGCCGA GGCGGTAGAG
CAAGTACAAC AGCAAAATAA AGCCTGGGCG GCATTAGGAA GAAAAAGCCA AGCTTTCGAG
GCGGAGCGTT CGGAAGAAGA GAAGGCCCCA GGAAACGAAT CTGGAGGCGC AGTTAATCTC
TTGGCCGTTC GGGAGCATGT TCTACCTTTA TTATCTAAGG AGAGGGGGCC TGGGGTCCAA
GAAAGCAGTG GTGAGGATAT TCATCTACAG ACGCTGTTGT CTTTAACTCA GGAGGCTTTG
GAAACACGGG CTCAGGAAAA TGAAGCGTTG CAAGCTCGTC TCCAAGCAAT GGAATTACAA
GTCAATACCT TGCAGCAACT GTTATCGGCG CAGGATGCCC GGCTCGTAGG GTTGGAAGGC
CCAGAGGAGA CCAGTAAAAA GGAAATTTTA GAGGGCCAAG ACGGGAAGTT TGAGAAAGTG
GAGTTTTTAG CTCCTTCGAT GGAGGAAATT GCTACTTTAA CCTTATCTTC TCCTGGGGAG
GAGGAGGCGC TTCCTTCCTC TGGAGAAAAG GCTTTAGAGA CTGCACTCCC TGTATCTTCT
GATGCTCTAT CGGCAACGGA GGAACGGGTG CCCGAGCAGA CAAAGCAGGC CGGGGAATTT
GTTTCTGCAG AAGAGGTAAG CGAGCCTGAG GGGGCATTTA GCGCCTTTAT GAATTTGAAA
AATCTTCTTC TGCTTAGTGG CAGCAGTATA CTGCTCTTAA TTCTGGCTGT TTTACGTTTA
CGCAAGCGTA AAACTACTGA GAAACCCGCG CTAACGATAG CTGAGCAGGA AGAAGCAGGC
AAAGATGGAG ATGATGAAGC TAGCGAAGTC CTTGCTAAGG AAATAGGGCC AATCGCTCCG
TTAGAGCAGG AAGTAGTCCA TGGGATGAAG GCGCCTGCCT CCTCAACGGC ATCCCAGATC
CAGGCAGAGA GTCATGAGAT TATGGCCGAA GTTGATGACT ACCTTGCTTT TGGCCGCCAT
CACGAGGCGG CGACGGCGCT CAAGGAGGCT TTGCTCCAGG AACCTGGGCG GCAGGATTTA
AAATTCAAAT TGGCCGAAGT TTATCATGCC GCAGGTAATG GGAGTGCCTT TGTGGATTTA
GTGGAAGAAT GGGCACCAAA TCCACATGGA GACGATGGCC TATGGGCGGA TTTGGTAGCG
ATGGGAAAAG ATTTGAGACC CGGGCACGCT TTGTTTACCA GTTTGCGGCA AGATGATGCA
GCCGCCCAAG TGGGCTTGGA ACTTCCTGCT AGCGATTTTT CCTTGGATTT CAGTCCAGGG
GACTTACTCT CTGATGAAAA TTCGGCAGTG CCATTCTCTC CTGCCGAGGA GGAGGCATCG
GCAGGAGAGA ATTCTTCTGT GGAGACACCC CAGGCAGAGG AGGTGGGCCT GGAATTTGAC
TTAGAGGGGA TGGTGTTAGC TAAGCCTAGT GTTCAGGATG ATGGAATAAC AGATCAGCCG
GTGGAGGCTG AGAGGGAAGA GGGAGTTATA GAGTTTGAGC CTTTCTCTTC TCCGCTAGGG
ACGGAAGAGA ATGTGAAGGA AGCAGAAAAT TCGGAACAAT CCCTAGAATT CTTTTCCCCG
GAGTTTGAAA TACAGGAAGA TAACCAAGGG CTGTTAGTAT TGGAAACCCC TGTTGACGAT
CCGGAGTCAA CCCCGTTGGA ACCTGCCGAC CCTGCCGCTT CAGTAGATAC CCTGGGAGAG
GACATGAGTG AAGCTTCCCT CCCTGGGAAG GCGCTGCTGG AGGATCTGGA TGAGATGGAA
GTCAAGTTGG ATTTGGCGCG GGCTTATATG GATATGGGCG ATGCCGATGG TGCCCGCGGC
CTGTTGGAAG AGGTTGTTGC TGAGGGCACT GAGCAGCAGC GAGATACAGG AGAGGGACTG
CTTGCCGAGC TAGCGAAGGC TTCTTGA
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| Protein sequence | MVRKTIVSVS VAGLLAASSS WEAYSLGIGG ISLKSGLNQP FKAEIPLHAV RENSLEDIKV
KLAPSEDFFR AGLDRALVLS NLRFRPLRKE TGETVIEVTS QGPIREPFLD FLVAVTWPQG
HLLREYTVLL DPPFLMEPGP AIVSSIASVQ DTVAPVTPQK AETWSVQIPE PLVESTMVSS
TAKADSSAYG PIRPAETLWP IAQRVRSSSS IAPQQMMLAL LRANPDVFLH GNINGLKVGR
MLTIPAEEEA LKLTFAEAVE QVQQQNKAWA ALGRKSQAFE AERSEEEKAP GNESGGAVNL
LAVREHVLPL LSKERGPGVQ ESSGEDIHLQ TLLSLTQEAL ETRAQENEAL QARLQAMELQ
VNTLQQLLSA QDARLVGLEG PEETSKKEIL EGQDGKFEKV EFLAPSMEEI ATLTLSSPGE
EEALPSSGEK ALETALPVSS DALSATEERV PEQTKQAGEF VSAEEVSEPE GAFSAFMNLK
NLLLLSGSSI LLLILAVLRL RKRKTTEKPA LTIAEQEEAG KDGDDEASEV LAKEIGPIAP
LEQEVVHGMK APASSTASQI QAESHEIMAE VDDYLAFGRH HEAATALKEA LLQEPGRQDL
KFKLAEVYHA AGNGSAFVDL VEEWAPNPHG DDGLWADLVA MGKDLRPGHA LFTSLRQDDA
AAQVGLELPA SDFSLDFSPG DLLSDENSAV PFSPAEEEAS AGENSSVETP QAEEVGLEFD
LEGMVLAKPS VQDDGITDQP VEAEREEGVI EFEPFSSPLG TEENVKEAEN SEQSLEFFSP
EFEIQEDNQG LLVLETPVDD PESTPLEPAD PAASVDTLGE DMSEASLPGK ALLEDLDEME
VKLDLARAYM DMGDADGARG LLEEVVAEGT EQQRDTGEGL LAELAKAS
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